| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0039 |
|---|
| Symbol | |
|---|
| ID | 8412881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | - |
|---|
| Start bp | 45727 |
|---|
| End bp | 46251 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 645021607 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003179068 |
|---|
| Protein GI | 257783851 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAGG TAGATATCAA GAGCCTGCAG CTCAACCCTT GGTCGCTTTT CGGCGACCGA
TGGGCGCTCA TCACCGCCGG CAACGAGTGC GATGGCTTCA ACACCATGAC TGCGGCGTGG
GGTCATTTCG GAACGCTCTT CAGCTTGCGG GGAGGCTCCC TCAATACCAC TATCTGCTAC
ATCCGTCCCC AGCGCTACAC AAAGGTCTTC ATGGACAGCC ATGATACCTA TACGCTCTCG
TTTTTCCCCG ACACGGCGGA ATACAAGAAG AAGCTGGCCC ACCTTGGCGC AAGATCAGGG
CGCGATGAGG ACAAGGTTGC CCACGTAGGC CTTACGCCCA AGTTCCTCGA GGGAACGACT
ACCTTCGAGG AGGCCAGCCT CGTCTTCGTG TGTCGCAAGA TCTATGTGGA TGATCTTGCC
GAGGAAAACT TCATAGATGT CGGTATTGTC GAGAAGAACT ACCCGCTTCG GGACTTCCAT
ACCCGCTATA TTGGCGAGAT TCTCAAGGTC TACGTCGCCG ATTAG
|
|---|
| Protein sequence | MHEVDIKSLQ LNPWSLFGDR WALITAGNEC DGFNTMTAAW GHFGTLFSLR GGSLNTTICY
IRPQRYTKVF MDSHDTYTLS FFPDTAEYKK KLAHLGARSG RDEDKVAHVG LTPKFLEGTT
TFEEASLVFV CRKIYVDDLA EENFIDVGIV EKNYPLRDFH TRYIGEILKV YVAD
|
|---|
| |