Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0030 |
Symbol | |
ID | 8412872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 37975 |
End bp | 38844 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645021599 |
Product | Phosphomethylpyrimidine kinase type-1 |
Protein accession | YP_003179060 |
Protein GI | 257783843 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
TIGRFAM ID | [TIGR00687] pyridoxal kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGAAA CCAACTCCGT TCTGTACCAG CGAGAAAGCT CGTACATCCC CCGTATTGCC GCAGTGCATG ACCTCTGTGG ATACGGAAAA TGCTCGCTTG GTATAGCCAT TCCGGTGCTT TCTGCAGCGG GATGTGACGT TTGTCCAGTG CCTACATCTC TTTTCTCGGC ACACACCAAG TTCCCTACGT TCTACATGCA TGACACCACC AACATGCTCG AGGATTATCT TGATGCATGG CAGGAAGAAG GCATTGACCT GGACGCTATT TATTCTGGCT TCCTTGGCGC TGCAGAGCAG GTTGCAAGCA TTCAACGTTT ATATCAGGAG CATCCAAAAG CACTTCGCAT TGTTGATCCA GTTATGGGCG ATGGCGGCAA GATGTATCCA ACATATACGC AAGAGCTTTG TGACGCAATG AAATCCCTGG TAAACGGTGC CGATATTCTG ACACCAAACC TTACAGAAGC TTCGATTCTA ACTGGTATTC CTTACGCTGG TCAAAATTTA ACTGACGAGC AAGTAAATGA ACTACTCGAC GCGTTACTTG AAATGGGTGC AAAGTGCGTT GTTCTTAAGG GTATTGTTCG CAATGATAAT CTTATCCGCA ACTTTGTTGC TACCGAGTCT GAGCGCGGTG AAATTGTTTC CGAGCTTCTG CCATACATGC TGCACGGAAC CGGCGATCTG TTTGCTTCTG CACTTTTAGC TGCAGTTATG TGTGGCCAGG AAATTGCTGA CGCTGTCGAG TTTGCTGGTG AGTTTGTTTG CGAGTCCATG GAGATTACTC GTGAGCAGCC AAACTTTGAG CTTCGCGGTG TTTCGTTTGA AACAAAGCTT GGCCTGATTA CTCAGCTTCT GCAAGAGTAG
|
Protein sequence | MNETNSVLYQ RESSYIPRIA AVHDLCGYGK CSLGIAIPVL SAAGCDVCPV PTSLFSAHTK FPTFYMHDTT NMLEDYLDAW QEEGIDLDAI YSGFLGAAEQ VASIQRLYQE HPKALRIVDP VMGDGGKMYP TYTQELCDAM KSLVNGADIL TPNLTEASIL TGIPYAGQNL TDEQVNELLD ALLEMGAKCV VLKGIVRNDN LIRNFVATES ERGEIVSELL PYMLHGTGDL FASALLAAVM CGQEIADAVE FAGEFVCESM EITREQPNFE LRGVSFETKL GLITQLLQE
|
| |