| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0012 |
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| Symbol | |
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| ID | 8412852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 16020 |
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| End bp | 17018 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645021580 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_003179043 |
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| Protein GI | 257783826 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.294496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAGA CAACCATTAT TGACCTTGCA AAATTAGCAA ATGTTTCCAT TGCCACCGTT
TCAAACTACC TCAATGGACA CTTTGAAAAA ATGTCCGAAG CAACTAAGCA ACGCATCAAA
AAGGCAATCG AGAATACAGG ATATATCCCA AGTGCTCAAG CTCAAGCAAT GGTAAAAAAG
AGCTCCGGAA TTATTGCTGT TCTGATTTTG GACAATACTA ATGCTTGGGC CGCTCAAATG
ACTAACGGCA TTGAAGATGC TGCTCTTGAA GCTGGATATC AGACGATAAT TTGCAATTCT
CGCTTTGACC CCACTCTTGA AGCCGATTGG GTTGAAAAAA TGCTTTCAAT TGGAGCAGAT
GGACTGCTTA TCCAGCCTAC CAATCAATTT AGAGCGGTAG ATAGGCGAAT TGCTAAAGTT
GGAAAACCTG TTGTCTATTT TGATTGCGAC CTTCTCACTT TTAATACCTC CTGGATAAAA
AGCAACCTCT ACGACGGTGT TTATTCGGCC GCAACCTACT GCGTTGAAAA CGGCTACGAA
GACTTTTTAA TTATTGGAGG AGAGCCAAAA GGCCGCACCA GAATTGAACG TGAATACGGC
TTTATCGATG CTTTAGAGGC TTCAAATAAA CCTCATGAGC GACTGACCAT AGAACAAAAC
ACGCTGTCTA TCTCTGATAT TAAGCAATGG CTAAATAATC ACATTTTTCC ATCAAAGAAA
ACTCTAGTGT TTGTGCCAAA TCAGTGGGCT CTCAAAAGTG TATATACCGC CTTGCATGCT
TATGAAAAAG CGATTCCCGA ACAAGTTGGA TTGCTGGGAT TTAACAACAC CGATTGGACT
GACTTACCTG TTAAAAGCAT CTCAACTATC GTTGAGCCTG TTTATGAAGA AGGCTATACC
GCTTGCAAGA TGCTCCTTGA AAAGATCAAA GATTCCTCGC TCGAACCCGA GCATAAGCTG
CTAACCTGCA AACTAAATTG GCTTAAATCA ACCATTTAA
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| Protein sequence | MPKTTIIDLA KLANVSIATV SNYLNGHFEK MSEATKQRIK KAIENTGYIP SAQAQAMVKK
SSGIIAVLIL DNTNAWAAQM TNGIEDAALE AGYQTIICNS RFDPTLEADW VEKMLSIGAD
GLLIQPTNQF RAVDRRIAKV GKPVVYFDCD LLTFNTSWIK SNLYDGVYSA ATYCVENGYE
DFLIIGGEPK GRTRIEREYG FIDALEASNK PHERLTIEQN TLSISDIKQW LNNHIFPSKK
TLVFVPNQWA LKSVYTALHA YEKAIPEQVG LLGFNNTDWT DLPVKSISTI VEPVYEEGYT
ACKMLLEKIK DSSLEPEHKL LTCKLNWLKS TI
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