| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0006 |
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| Symbol | |
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| ID | 8412844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 5858 |
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| End bp | 7801 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645021572 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_003179037 |
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| Protein GI | 257783820 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAAAAG AAAATAAGTA TAACGGTACA GAGATTAAGA TTCTTGAAGG CCTTGAGGCG
GTTCGTAAGC GCCCAGGTAT GTATATTGGT ACAACTTCAG CTTCTGGCTT GCATCACCTT
GTTTGGGAGA TCGTAGATAA CTCGGTCGAT GAGGCAATGG CTGGTTATTG CTCAAAAATT
AAAGTAACCA TTCATCCAGA TAACTCCATT TCTGTTGAAG ATAATGGCCG TGGTATTCCT
GTAGACCTTC ATCCTCAGAA AAAAATTCCA ACCCTTGAGG TTGTTCTTAC CATCCTGCAT
GCAGGAGGTA AGTTTGATAA CAACGCGTAT AAAGTCTCCG GTGGTCTTCA TGGCGTTGGC
GTTTCTGTTG TAAATGCACT TTCAAAGAAA CTTGTTGCGC AGGTTAAGCG TGACGGAAAA
ATTTATGAGA TGGTCTTTGA GCGCGGTAAA ACTGTTCAAA AGATGAAGGA AATTGGTACT
TCAAAATCTA ATGGAACTAC CATTACCTTC TGGCCAGACG ATATGATTTT TGAGACCACT
ACATATAACT TTGATACGCT CCGTGATCGT CTACAGGAGA CTGCCTTCCT CAACAAGAAC
CTTAAGATTA CCCTTGTCGA TGAGCGCGAG CTTACCCCTC GTCAGGTTGA CTTCCAGTAT
GCTGGCGGCA TCATTGATTT TGTTAAGTAT CTTAATGACG AGAAGACCGT TTTACCAGGA
CTTTCTCGCC CTATCTATAT TGAAGGTAAG TCCGACCCTG ACGCTCCAAT GTCTCAGATG
GGCGAGGTAG AGGTTGCTAT TCAGTGGAAT ACCGACTTCA GCGATAGAAC TCTTTCTTTT
GCTAATGATA TTTTTACTGA GGAAGGCGGA ATGCACCTCG AGGGTTTCCG TACTGCTCTT
ACAAAGGTAG TAAATGATTA CGGTACCAGA CAGGGAATTC TTAAAGAGAA AGACCCTAAG
CTTGAGGGTG GCGATATTCG CGAGGGTTTA ACTGCAGTTA TTTCAGTTAA ATTGCCAGAT
CCTCAGTTTG AAGGTCAGAC AAAGGCAAAA CTTGGTAGTT CTTACATGAG AACTCTTACT
AACAAGATTG TTACTCAGGG TCTCTCAGAG TACCTTGAAG AGCATCCAAA CCAGGCAAAA
GAGATTCTTA AAAAAGCATC TCAGGCTGCA AAAGGACGCC TTGCTGCTCG TAAAGCTCGT
GAAGCAACAC GTCGTAAAGG CCTTCTTGAG TCTGCAGCTC TTCCTGGAAA GCTTGCAGAT
TGCTCCGTCC GTGATGCAGA GATGACTGAG CTCTTCATCG TCGAGGGTGA CTCCGCAGGT
GGTTCTGCAA AGATGGCACG TGACCGCTCT ATTCAGGCAG TTCTTCCACT TCGAGGAAAG
ATTTTAAATG TTGAGCGCGT GCAAGCTCAC CGTGCACTTT CTTCTGACAC TATTACTTCG
CTGATTACCG CTATTGGTAC TGGTGTTGGA GATGAATTTA GTCTTGAGAA GGCCCGCTAT
CACAAAATTG TCATCATGAC CGATGCTGAT GTTGACGGTT CTCACATTAG AATTCTTCTT
CTTACCTTCT TCTATCGTTA CATGAAGCCA ATGATTGATG CAGGTTATAT CTACGTTGCT
CAGCCTCCTC TGTATCAGAT CAAACCAAAG GGCAAGAAGA ACGGCAAATA CATCTATACC
GATGAAGAGC TTGCTCTTGA GACAAAGAAG TTTGAGGACA ACACCAAGTA CACCATTCAG
CGCTATAAGG GTCTTGGTGA AATGGATCCA GAGCAGCTGT GGGCAACTAC TATGGAGCCA
AAGAATCGTA TTCTTCTCAA GGTAACCATC GATGATGCTC TTGCAGCTGA CCGCGCAGTT
TCTGACCTTA TGGGTAATCA GGTTGAGAAG CGCAAAGACT TCATTCAAAC ACACGCAAAA
GACGTCCGCT TCCTGGACAT TTAA
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| Protein sequence | MAKENKYNGT EIKILEGLEA VRKRPGMYIG TTSASGLHHL VWEIVDNSVD EAMAGYCSKI
KVTIHPDNSI SVEDNGRGIP VDLHPQKKIP TLEVVLTILH AGGKFDNNAY KVSGGLHGVG
VSVVNALSKK LVAQVKRDGK IYEMVFERGK TVQKMKEIGT SKSNGTTITF WPDDMIFETT
TYNFDTLRDR LQETAFLNKN LKITLVDERE LTPRQVDFQY AGGIIDFVKY LNDEKTVLPG
LSRPIYIEGK SDPDAPMSQM GEVEVAIQWN TDFSDRTLSF ANDIFTEEGG MHLEGFRTAL
TKVVNDYGTR QGILKEKDPK LEGGDIREGL TAVISVKLPD PQFEGQTKAK LGSSYMRTLT
NKIVTQGLSE YLEEHPNQAK EILKKASQAA KGRLAARKAR EATRRKGLLE SAALPGKLAD
CSVRDAEMTE LFIVEGDSAG GSAKMARDRS IQAVLPLRGK ILNVERVQAH RALSSDTITS
LITAIGTGVG DEFSLEKARY HKIVIMTDAD VDGSHIRILL LTFFYRYMKP MIDAGYIYVA
QPPLYQIKPK GKKNGKYIYT DEELALETKK FEDNTKYTIQ RYKGLGEMDP EQLWATTMEP
KNRILLKVTI DDALAADRAV SDLMGNQVEK RKDFIQTHAK DVRFLDI
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