| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_3208 |
|---|
| Symbol | |
|---|
| ID | 8412761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 3098300 |
|---|
| End bp | 3099076 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645021553 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_003179018 |
|---|
| Protein GI | 257389245 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.229767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.168477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCGGA TCAGCGTCCC CGTCGCGACG CGCGCGCCGA GCGGACAGAC GAACGCGTAC
GTCCTCGGCC GCGACCGCGC GGCCGTGATC GACCCGTGTG CTCGCCACGA ACGCGTAGAC
GACGCGCTGG CGTCGCGCTC GCTTGCTCAC GTTCTCGTCA CGCACCACCA CCCGGACCAC
GTCGGCGGCG TCGCCGACTA CGCGGCCGAA CACGACGCCA CGGTGTGGGC GCGTCGGGGC
CGTGAGGCGG CCTTCGAGGC CGCGACCGGC GTCACACCGA ACCGAACGTT CTCTGAGGGG
ACGGAAATTC CCGTCGACGA CGGCCAGCTG CGAGTCGTCG AGACGCCGGG CCACGCGCCC
GAACACGTCG CCTTCGCGAC CGACGACGGG CTCGTCTGTG GCGACCTGGC CGCGGCCACC
GGCAGCGTCG CAGTCGGGGC ACCGGAGGGA GAGATGCGAG CATACTGTTG CTCGCTGCGG
CGCGTGATCG CGCGTGCTCC CGGCCGACTC TTCCCCGGTC ACGGCCCCGT CGTCGACGAC
GCGGGCGAGA CCTGCCGTCG CCTCCTCGCA CACCGGCTCG ATCGCGAACG CCGGGTCGAA
GCGGCCGTCG TCGAGGGCCA CGAGACGCTG CCGGCGATCA CCGACGCGGC CTACGACAAG
GGCGTCGAGA ACGTGCGAGA TCTCGCCGAG GCGACCGTCG CCGCCCACCT CGAAAAGCTC
GCCGTCGAGG GGCGAGTCGC GTGGGACGGC GAGCGCGCAC GGCCAGCGTC GGCGTGA
|
|---|
| Protein sequence | MERISVPVAT RAPSGQTNAY VLGRDRAAVI DPCARHERVD DALASRSLAH VLVTHHHPDH
VGGVADYAAE HDATVWARRG REAAFEAATG VTPNRTFSEG TEIPVDDGQL RVVETPGHAP
EHVAFATDDG LVCGDLAAAT GSVAVGAPEG EMRAYCCSLR RVIARAPGRL FPGHGPVVDD
AGETCRRLLA HRLDRERRVE AAVVEGHETL PAITDAAYDK GVENVRDLAE ATVAAHLEKL
AVEGRVAWDG ERARPASA
|
|---|
| |