Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_3176 |
Symbol | |
ID | 8412729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 3068669 |
End bp | 3070222 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645021523 |
Product | ABC transporter related |
Protein accession | YP_003178988 |
Protein GI | 257389215 |
COG category | [R] General function prediction only |
COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.128426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.259779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGGGA GCGGGGCACC AGCCGTCGAA CTCGACGCCA TTACCAAACG CTTCGGGGAT GTCGTCGCCA ACGACGGCGT CGACCTCACG CTCGAACGCG GGACGGTCCA CGCGCTCGTC GGCGAGAACG GAGCGGGCAA GACGACGCTG ATGAGCGTCC TCTACGGGCT CTACGAGCCC GACGAGGGGA CGATCCGCGT CGACGGACAG CCCCGGACGT TCGACTCGCC GCGGGACGCG ATCGACGCCG GAGTCGGCAT GATCCACCAG CACTTCCAGC TCGTGGATAC GATGACCGTC CTCCAGAACG TCGTCCTGGG CCACGAGCCG ACGGACAACG GGCTCGTCGA TCAGGACAGC GCCCGAGCGG CGATCGACGA GGTCTGTTCG ACCTACGGCT TCGACATCGA TAAGCACCTG GACACGCGAA TCGAGGACCT CGGCGTCGGC GTCCAGCAAC GCGTCGAGAT CGTCAAGAGC CTCTACCGGG GGGCAGACAC GCTGATCCTC GACGAGCCCA CCGCAGTGTT GACTCCCCAG GAGGTCGACG AGCTGTTCGA CGTGATGGCA GAGCTGACCG ATCGTGGCCG GTCGCTGATC TTCATCACCC ACAAGCTCGA CGAGGCGATG GCCGTCGCCG ACGATATCAC CGTCCTCCGG GACGGCGAGT CGGTCGGGAC TGTCGACGGA GCCTCGACGA GCGAGCAGGA ACTCGCGCGC ATGATGGTCG GCCGGGACGT GCTCTTCGAG GGCCAGGAAC GCACGACCGA GCCCGGTTCG GTCACCCTCG ACGTAGCGGA TCTGCGCGTC CAAGACGACC GCGGGCTCGA ACAGGTCAGC GGGATCGACC TCTCGGTGCG GTCCGGCGAG GTGCTGGGGA TCGCGGGGGT CGACGGCAAC GGCCAGGCCG AACTCGTCGA GGCGATCACC GGGCTGCGGT CGGTCGAGTC CGGGGCAGTC ACCTTCGAAG GGCGAGACAT CACCGAGACG AGCCGGCGCG ACCGCATCGA GTCGGGCATC GCCTACATCC CGGAAGACCG CCAGACCGAG GGGCTCGTCC AGGAGTACGA CCTCGTCCGG AACGCCCTGC TCGGGAACCA GACCATCGAG CCGTTCGTCG AGAACGGCTT CGTCGACTGG GATCTCGTCC GCGAACACGC GGCCGAGATC GTCGCCGAGT ACGACGTGCA ACCGCCCCAC GTCGAGGCCG ACGCCGGCTC GCTCTCGGGA GGCAACCAGC AGAAGTTCGT CGTCGGACGC GAACTCAGAC ACGACCCGGA CCTGGTGGTC GCCTCACATC CGACTCGGGG GGTCGACATC GGTTCGATCG AGTTCATTCA CGGTCGACTC CACGAGATGC GCGACGAGGG GATGGCGATT CTGCTGGTCT CCTCGAAGCT CGACGAGGTC CAGAAGCTCT CGGATCGCCT CGCGGTGATC CACGAGGGCG AGTTCGTCGA CGTGGTCGAT CCGGACGCCG TAACCGAGGG GGAACTCGGC CTGCTGATGG CCGGGCGAGA GCGGGCGGCC GCCGACGGAG GTGTCGAGCG GTGA
|
Protein sequence | MSGSGAPAVE LDAITKRFGD VVANDGVDLT LERGTVHALV GENGAGKTTL MSVLYGLYEP DEGTIRVDGQ PRTFDSPRDA IDAGVGMIHQ HFQLVDTMTV LQNVVLGHEP TDNGLVDQDS ARAAIDEVCS TYGFDIDKHL DTRIEDLGVG VQQRVEIVKS LYRGADTLIL DEPTAVLTPQ EVDELFDVMA ELTDRGRSLI FITHKLDEAM AVADDITVLR DGESVGTVDG ASTSEQELAR MMVGRDVLFE GQERTTEPGS VTLDVADLRV QDDRGLEQVS GIDLSVRSGE VLGIAGVDGN GQAELVEAIT GLRSVESGAV TFEGRDITET SRRDRIESGI AYIPEDRQTE GLVQEYDLVR NALLGNQTIE PFVENGFVDW DLVREHAAEI VAEYDVQPPH VEADAGSLSG GNQQKFVVGR ELRHDPDLVV ASHPTRGVDI GSIEFIHGRL HEMRDEGMAI LLVSSKLDEV QKLSDRLAVI HEGEFVDVVD PDAVTEGELG LLMAGRERAA ADGGVER
|
| |