Gene Hmuk_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3176 
Symbol 
ID8412729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp3068669 
End bp3070222 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content67% 
IMG OID645021523 
ProductABC transporter related 
Protein accessionYP_003178988 
Protein GI257389215 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.128426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.259779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGA GCGGGGCACC AGCCGTCGAA CTCGACGCCA TTACCAAACG CTTCGGGGAT 
GTCGTCGCCA ACGACGGCGT CGACCTCACG CTCGAACGCG GGACGGTCCA CGCGCTCGTC
GGCGAGAACG GAGCGGGCAA GACGACGCTG ATGAGCGTCC TCTACGGGCT CTACGAGCCC
GACGAGGGGA CGATCCGCGT CGACGGACAG CCCCGGACGT TCGACTCGCC GCGGGACGCG
ATCGACGCCG GAGTCGGCAT GATCCACCAG CACTTCCAGC TCGTGGATAC GATGACCGTC
CTCCAGAACG TCGTCCTGGG CCACGAGCCG ACGGACAACG GGCTCGTCGA TCAGGACAGC
GCCCGAGCGG CGATCGACGA GGTCTGTTCG ACCTACGGCT TCGACATCGA TAAGCACCTG
GACACGCGAA TCGAGGACCT CGGCGTCGGC GTCCAGCAAC GCGTCGAGAT CGTCAAGAGC
CTCTACCGGG GGGCAGACAC GCTGATCCTC GACGAGCCCA CCGCAGTGTT GACTCCCCAG
GAGGTCGACG AGCTGTTCGA CGTGATGGCA GAGCTGACCG ATCGTGGCCG GTCGCTGATC
TTCATCACCC ACAAGCTCGA CGAGGCGATG GCCGTCGCCG ACGATATCAC CGTCCTCCGG
GACGGCGAGT CGGTCGGGAC TGTCGACGGA GCCTCGACGA GCGAGCAGGA ACTCGCGCGC
ATGATGGTCG GCCGGGACGT GCTCTTCGAG GGCCAGGAAC GCACGACCGA GCCCGGTTCG
GTCACCCTCG ACGTAGCGGA TCTGCGCGTC CAAGACGACC GCGGGCTCGA ACAGGTCAGC
GGGATCGACC TCTCGGTGCG GTCCGGCGAG GTGCTGGGGA TCGCGGGGGT CGACGGCAAC
GGCCAGGCCG AACTCGTCGA GGCGATCACC GGGCTGCGGT CGGTCGAGTC CGGGGCAGTC
ACCTTCGAAG GGCGAGACAT CACCGAGACG AGCCGGCGCG ACCGCATCGA GTCGGGCATC
GCCTACATCC CGGAAGACCG CCAGACCGAG GGGCTCGTCC AGGAGTACGA CCTCGTCCGG
AACGCCCTGC TCGGGAACCA GACCATCGAG CCGTTCGTCG AGAACGGCTT CGTCGACTGG
GATCTCGTCC GCGAACACGC GGCCGAGATC GTCGCCGAGT ACGACGTGCA ACCGCCCCAC
GTCGAGGCCG ACGCCGGCTC GCTCTCGGGA GGCAACCAGC AGAAGTTCGT CGTCGGACGC
GAACTCAGAC ACGACCCGGA CCTGGTGGTC GCCTCACATC CGACTCGGGG GGTCGACATC
GGTTCGATCG AGTTCATTCA CGGTCGACTC CACGAGATGC GCGACGAGGG GATGGCGATT
CTGCTGGTCT CCTCGAAGCT CGACGAGGTC CAGAAGCTCT CGGATCGCCT CGCGGTGATC
CACGAGGGCG AGTTCGTCGA CGTGGTCGAT CCGGACGCCG TAACCGAGGG GGAACTCGGC
CTGCTGATGG CCGGGCGAGA GCGGGCGGCC GCCGACGGAG GTGTCGAGCG GTGA
 
Protein sequence
MSGSGAPAVE LDAITKRFGD VVANDGVDLT LERGTVHALV GENGAGKTTL MSVLYGLYEP 
DEGTIRVDGQ PRTFDSPRDA IDAGVGMIHQ HFQLVDTMTV LQNVVLGHEP TDNGLVDQDS
ARAAIDEVCS TYGFDIDKHL DTRIEDLGVG VQQRVEIVKS LYRGADTLIL DEPTAVLTPQ
EVDELFDVMA ELTDRGRSLI FITHKLDEAM AVADDITVLR DGESVGTVDG ASTSEQELAR
MMVGRDVLFE GQERTTEPGS VTLDVADLRV QDDRGLEQVS GIDLSVRSGE VLGIAGVDGN
GQAELVEAIT GLRSVESGAV TFEGRDITET SRRDRIESGI AYIPEDRQTE GLVQEYDLVR
NALLGNQTIE PFVENGFVDW DLVREHAAEI VAEYDVQPPH VEADAGSLSG GNQQKFVVGR
ELRHDPDLVV ASHPTRGVDI GSIEFIHGRL HEMRDEGMAI LLVSSKLDEV QKLSDRLAVI
HEGEFVDVVD PDAVTEGELG LLMAGRERAA ADGGVER