Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_3175 |
Symbol | |
ID | 8412728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 3067417 |
End bp | 3068619 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645021522 |
Product | basic membrane lipoprotein |
Protein accession | YP_003178987 |
Protein GI | 257389214 |
COG category | [R] General function prediction only |
COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.142752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.23342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTTCAG AACCAGATCC AGACGGCGAA TCGACGGCAG TCGACCAGCG GGGAGACTCC GACACACCGA TCAACCGACG CGACGTGCTC CGGTCGGGAG CGGCGGTCGC TATCACCGGC GGCCTCGCCG GTTGTCTGAC CGGCGACGGC GGCGACGGTG CCGGTGACGG GGGCGACGGC GGCGACGGCG ACACGGAGAC AGACACGACC GACGGCGGCG AGGGCGGGAC GACGAACATC GCGATCGTCT CCAGTTCCGC CGGCTTCGGC GACCGCGCGT TCAACGACCT CGCACTGGAG GGGCTGGAGA ACGCCGCCGA GGAGTACGAC ATCGAACTCC AGCAGGTCGA AGAGACCAAC CAGTCCAACT ACGGGACCGT CCAGTCCCGG CTCGCAGAGA GCCAGAACCC CGACTACGAC CTGATCGTCC TGGTCGGCTA CCAGCACACC CAGGCACTGG AGACCAACGC CGAGGAGTAC TCCGACCAGC GCTGGATGCT GATCAACGAC CACATCGAAC GGCCAAACGT CGGCGGCTAC ATCTGGGCCA ACCACGAGAT GTCGTTCCAG GCGGGCGTCC TCGCCGGGAC GATGACGACC CGAGAACTCA CGCACGAAGG GAACTCCAAC GACCCCGACG GGACCACCGT CGGCTTCGTG GGCGGCGTCG ACGGGGCGCT GATCAACGCG TTCGAACGCG CCTACGTCGC TGGCGTCGAG TGGGTCAACG AGGACGTAGA CGTGCGGGTC GGCTACATCG GCAACTACGA GGACACCCAG ACGGCGGCCA ACATCGCCTC CTCGCAGTAC GACGCCGGGG CGGACATCGT CTACCAGGCC GCGGCGGCCG CCGGACAGGG CGTCTTCCAG GCCGCACAAG AAGCGAACCG CTTTGCAATC GGCGTCGACG CCGACCAGTC GGTGACGCTG CCGGACTACC AGGACGTGAT CATCGGCTCG GCGATCAAGC GCATCAACGA AGGGACCTAC CGCGTCGCGG AGGGCATCGT CCAGGACAAC TGGGACGAAG TCAGCGGTCG AAACGTCCTC GGCCTCGACC AGGACGCCGT CGCGGTCGTG CTGGGCCAGG CGATCGGCTC GAAGTTGCCC GACGCCGTGA GCCAGAACCT CGAAGAGTCG AAGCAGGCCA TCGTCGACGG CGACGTGACC GTCCCCTGTA CGGCCGCCGG CTGTCAGGAC TGA
|
Protein sequence | MVSEPDPDGE STAVDQRGDS DTPINRRDVL RSGAAVAITG GLAGCLTGDG GDGAGDGGDG GDGDTETDTT DGGEGGTTNI AIVSSSAGFG DRAFNDLALE GLENAAEEYD IELQQVEETN QSNYGTVQSR LAESQNPDYD LIVLVGYQHT QALETNAEEY SDQRWMLIND HIERPNVGGY IWANHEMSFQ AGVLAGTMTT RELTHEGNSN DPDGTTVGFV GGVDGALINA FERAYVAGVE WVNEDVDVRV GYIGNYEDTQ TAANIASSQY DAGADIVYQA AAAAGQGVFQ AAQEANRFAI GVDADQSVTL PDYQDVIIGS AIKRINEGTY RVAEGIVQDN WDEVSGRNVL GLDQDAVAVV LGQAIGSKLP DAVSQNLEES KQAIVDGDVT VPCTAAGCQD
|
| |