Gene Hmuk_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3175 
Symbol 
ID8412728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp3067417 
End bp3068619 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content67% 
IMG OID645021522 
Productbasic membrane lipoprotein 
Protein accessionYP_003178987 
Protein GI257389214 
COG category[R] General function prediction only 
COG ID[COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.142752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.23342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCAG AACCAGATCC AGACGGCGAA TCGACGGCAG TCGACCAGCG GGGAGACTCC 
GACACACCGA TCAACCGACG CGACGTGCTC CGGTCGGGAG CGGCGGTCGC TATCACCGGC
GGCCTCGCCG GTTGTCTGAC CGGCGACGGC GGCGACGGTG CCGGTGACGG GGGCGACGGC
GGCGACGGCG ACACGGAGAC AGACACGACC GACGGCGGCG AGGGCGGGAC GACGAACATC
GCGATCGTCT CCAGTTCCGC CGGCTTCGGC GACCGCGCGT TCAACGACCT CGCACTGGAG
GGGCTGGAGA ACGCCGCCGA GGAGTACGAC ATCGAACTCC AGCAGGTCGA AGAGACCAAC
CAGTCCAACT ACGGGACCGT CCAGTCCCGG CTCGCAGAGA GCCAGAACCC CGACTACGAC
CTGATCGTCC TGGTCGGCTA CCAGCACACC CAGGCACTGG AGACCAACGC CGAGGAGTAC
TCCGACCAGC GCTGGATGCT GATCAACGAC CACATCGAAC GGCCAAACGT CGGCGGCTAC
ATCTGGGCCA ACCACGAGAT GTCGTTCCAG GCGGGCGTCC TCGCCGGGAC GATGACGACC
CGAGAACTCA CGCACGAAGG GAACTCCAAC GACCCCGACG GGACCACCGT CGGCTTCGTG
GGCGGCGTCG ACGGGGCGCT GATCAACGCG TTCGAACGCG CCTACGTCGC TGGCGTCGAG
TGGGTCAACG AGGACGTAGA CGTGCGGGTC GGCTACATCG GCAACTACGA GGACACCCAG
ACGGCGGCCA ACATCGCCTC CTCGCAGTAC GACGCCGGGG CGGACATCGT CTACCAGGCC
GCGGCGGCCG CCGGACAGGG CGTCTTCCAG GCCGCACAAG AAGCGAACCG CTTTGCAATC
GGCGTCGACG CCGACCAGTC GGTGACGCTG CCGGACTACC AGGACGTGAT CATCGGCTCG
GCGATCAAGC GCATCAACGA AGGGACCTAC CGCGTCGCGG AGGGCATCGT CCAGGACAAC
TGGGACGAAG TCAGCGGTCG AAACGTCCTC GGCCTCGACC AGGACGCCGT CGCGGTCGTG
CTGGGCCAGG CGATCGGCTC GAAGTTGCCC GACGCCGTGA GCCAGAACCT CGAAGAGTCG
AAGCAGGCCA TCGTCGACGG CGACGTGACC GTCCCCTGTA CGGCCGCCGG CTGTCAGGAC
TGA
 
Protein sequence
MVSEPDPDGE STAVDQRGDS DTPINRRDVL RSGAAVAITG GLAGCLTGDG GDGAGDGGDG 
GDGDTETDTT DGGEGGTTNI AIVSSSAGFG DRAFNDLALE GLENAAEEYD IELQQVEETN
QSNYGTVQSR LAESQNPDYD LIVLVGYQHT QALETNAEEY SDQRWMLIND HIERPNVGGY
IWANHEMSFQ AGVLAGTMTT RELTHEGNSN DPDGTTVGFV GGVDGALINA FERAYVAGVE
WVNEDVDVRV GYIGNYEDTQ TAANIASSQY DAGADIVYQA AAAAGQGVFQ AAQEANRFAI
GVDADQSVTL PDYQDVIIGS AIKRINEGTY RVAEGIVQDN WDEVSGRNVL GLDQDAVAVV
LGQAIGSKLP DAVSQNLEES KQAIVDGDVT VPCTAAGCQD