| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_3174 |
|---|
| Symbol | |
|---|
| ID | 8412727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 3065499 |
|---|
| End bp | 3067085 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645021521 |
|---|
| Product | glycoside hydrolase family 3 domain protein |
|---|
| Protein accession | YP_003178986 |
|---|
| Protein GI | 257389213 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.108856 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.164805 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTGC CAGACGTGGC CGAACTCGAT CTCGCCACCA AAGTCGGACA GCTGTTCGTC
GTCGGCTTCG AGGGACCGGA GCCGACGGAG GACCTCCGCG AACTCCTCAC CGACTATCGC
TGTGGCAACG TCATCTACTT CAGCCGGAAC ATCGACTCGC CCGAGCAGGT CGCCGAGCTC
AGTCGCGAGC TACAGACCAT CGCCACCGAA GCGGGACCCG AGATCCCGCT GTTCGTGACG
GCCGACCAGG AGGGCGGCGT CGTCTCACGG ACCGACTGGG GGACCGAACC CCCGAGTCAG
ATGAGCATCG GTGCGGGCCG GGACGCCGAC CTCGCCCGTT CGGTGGGTGG CGCTGTCGGG
GCGGAACTCG CGTCGATCGG CGTCAACTTC GATCTGACGC CGGTGCTGGA CGTGAACAAC
AACCCGGACA ACCCCGTCAT CGGCGTCCGG TCGTTCGGCG AGGAGCCCGA ACTCGTCGGC
GATCTCGGCG CGGCGATGGC CGACGGCATG CAGTCCGAGG GCGTGCTGGC CTGTGGGAAG
CACTTCCCGG GCCACGGCGA CACCAGCGCC GACTCGCACC ACTCGCTACC CGTCGTCGAC
CACGACCGCG AGCGTCTCGA CGCCGTCGAA CTCGCCCCCT TCCGCCGGGC GATCGACGCC
GGGATCGACG CGATCATGAC GACACACGTC TCGTTCCCGA CGATCACCGG CGACGACGAA
CTCCCGGCGA CCGTCTCCCG AGACGTACAG ACCGGACTCC TCCGCGAGCA GTTAGGGTTC
GATGGCCTGG TCGTCACCGA CGGAATGGAG ATGAACGCCA TCGCCGACGA GATGGGGACG
CCGGAAGGGT GTGTCCAGGC CGTCGAAGCG GGCTGTGATC TCCTCCTGGT CTGTCACACC
CCCGCGGTCC AGAAAGACTC GGTCGAGGCG GTCATCGACG CCGTCGAGTC CGGCCGCATC
GACGAGTCGC GGATCGACGA CGCTGTCGAG CGCGTCCTCG AGTACAAGGA GCGACGCGGC
GTCGGCCAGC AGACGCCCTC GCTCGACCGC TGGGAGGCGA CCAGCGATCG CTCCCGCGAG
GTCGGTCGTG AGGTCGCCGC GGCCGGCATC ACGGTCGCTC GGGATCGAAA CGAGACGATT
CCCTTCGACA CCGGACGACC GCTTCACCTC GTCGGCTTCC CCGGCGGACG CGCTTCGCCG
GCAGAGGACG ACCGCTACGA GCCGACGCTG GTCGCCGACG CACTCGAAGC CGGCGGCTTC
GACGTGGAAC TGCACGAGGT GGAGACCGCC GACGCCCTGC CGTCGTTCGA GGGCGACGAA
CAGGTCGTGC TGGCGACCTA CAACGCCGCT GGCGACGACG AACAGGTGCG AGCGGTCGAG
CGACTGGACG AGGCCGTCGA CGCCTTCGCC GCGCTGGTGG TGCGCAACCC CTACGACCTC
GCTCGCTTCC CCGACGTGTC GACGGCGGTG TCGACCTACG ACTACACGCC CGCGACGCTG
TCGGTGACCG GCGAGATCCT GGCCGGCCGG CGTCGGGCCA GCGGTCGGCT GCCGGTGACG
ATCGCGGGCT TCGAGGCCGA GAACTGA
|
|---|
| Protein sequence | MSLPDVAELD LATKVGQLFV VGFEGPEPTE DLRELLTDYR CGNVIYFSRN IDSPEQVAEL
SRELQTIATE AGPEIPLFVT ADQEGGVVSR TDWGTEPPSQ MSIGAGRDAD LARSVGGAVG
AELASIGVNF DLTPVLDVNN NPDNPVIGVR SFGEEPELVG DLGAAMADGM QSEGVLACGK
HFPGHGDTSA DSHHSLPVVD HDRERLDAVE LAPFRRAIDA GIDAIMTTHV SFPTITGDDE
LPATVSRDVQ TGLLREQLGF DGLVVTDGME MNAIADEMGT PEGCVQAVEA GCDLLLVCHT
PAVQKDSVEA VIDAVESGRI DESRIDDAVE RVLEYKERRG VGQQTPSLDR WEATSDRSRE
VGREVAAAGI TVARDRNETI PFDTGRPLHL VGFPGGRASP AEDDRYEPTL VADALEAGGF
DVELHEVETA DALPSFEGDE QVVLATYNAA GDDEQVRAVE RLDEAVDAFA ALVVRNPYDL
ARFPDVSTAV STYDYTPATL SVTGEILAGR RRASGRLPVT IAGFEAEN
|
|---|
| |