Gene Hmuk_3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3146 
Symbol 
ID8412699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp3031288 
End bp3033180 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content69% 
IMG OID645021493 
Producttype III restriction protein res subunit 
Protein accessionYP_003178958 
Protein GI257389185 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0164842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACAG AGGACGACGC CGAGGCCGGC GGTGACGACG CGGGCGACCA GCCCGAGACG 
GTGACCGTCG CCGACGTGTA CGACGCCATC GACGCGGTCG GCAAACCACA CCTCACCCCG
GCGGAAGTGG CCGCCAAGAC CGGACTCACC GCCGACGAAG CCCGCGAGGC GCTTGAACGG
CTGGGCGAAG ACGCGGAACT GGAGCGCCAG GACGTGAGCG GCGCAGAGGC GGTCTACTAC
CCGCCGGATC TGGACGCGGT GACGGATCGG GAGCGCGTGA TCCTCTTCCC CGACCGCCAC
GAGGTCGTCG TGGAACACGC GGACCAGTTC ACCCGGGCAC AGCTCTCGCA GTTCGCCCAC
CTCGTCGACA CGAACCGCGC CGGCGGTGCC ATCTACGAGA TCCGCGAGGA GGACGTGTGG
CAGGCACCCT ACGAGTCCCT CGACGAGCTG CTGGCGACGA TCCACGACGT GGTCGGCGAG
CGCTCCGAAC ACTTAGAGGA GTGGGTTCGG AGCCAGTGGG AACGCGCCCG GAAGTTCCGG
CTCGTCACCC ACGAGGACGG CTACACCGTC CTCGAAGCCG AGAACGACGA CCTGATGGGC
AACGTCGCCC GCCAGAAGCT CGACGACGAC GTGTTGCGCG CGCCGATTTC GGACTCGGAG
TCGTGGGTCA ACGAGGAGAT GACCGCCCAG CTGAAACGGA CGCTGTACGA GGCCGGCTAT
CCCGTCAGAG ACGACCGCGA TCTCGAGGAC GGCGACGCGC TGTCGGTCGA ACTGGGGCTT
CCCCTGCGGG ACTACCAGGC CGACTGGGTA CAGCGCTTCC AGGAGCAGGG GTCGGGCGTG
TTCGTCGGCC CGCCGGGATC GGGCAAGACC GTCGCGACGA TGGGCGTGAT GGAGGCGGTC
GGCGGCGAGA CGCTGATTCT CGTGCCGTCG AGGGAATTGG CGAGCCAGTG GCGCGACGAA
CTCCTCCTGC ACACGGATCT CGACGAGAGC CAGATCGGCG AGTACCACGG CGGCGAGAAG
GCGATCCGAC CGGTGACGAT CGCGACCTAC CGCACCGCCG GGATGGACCG CCACCGCAAG
CTGTTCGACG AACGGCGCTG GGGACTGATC GTCTACGACG AGGTCCAGCA CATCCCCGCC
GACGTGGCCC GCCGGAGCGC CCGCCTGCAG GGCAAACACC GCCTCGGGCT GACCGCGACG
CCGGTCCGCG AAGACGATAA GGAAGAGGAG ATCTTCACGC TCGTGGGCCC GCCGATCGGC
ACGGACTGGT CGGCGCTGTT CGACGCCGGC TTCGTCCAGG AGCCGGAGGT CCAGATCCGC
CAGATTCCCT GGAGTGACGA CGAAGTGGCC GACGAGTACG TCTCCGCGGT GGGCCACGGC
CGCCGCCAGA CCGCCGCGAC GAACCCCGCG AAGATCGACG AGATCCGCCA CCTCCTGACC
GAGCACCCCC ACGCGAAGGC GCTCGTCTTC GTCGAGTACC TCGACCAGGG CGAGGCCATC
GCCGCAGAGC TCGACGTCCC TTTCATCAGC GGGGAGACCC GCCACGCCGA GCGCGAGCGC
CTGTTCGACG AGTTCCGACG CAACGAGCGG GACACGCTCG TGATCTCCCG GGTCGGCGAC
GAGGGGATCG ACCTCCCGGA CGCCGAACTG GCCATCGTCG CCTCGGGACT GGGTGGGTCC
CGCCGCCAGG GCGCCCAGCG AGCGGGCCGG ACGATGCGCC CCGTCGGCGA CGCGCAACTG
TACCTGCTGG CGACCCGTGG GACCGAAGAG GAGGACTTCG TCCGCCAGCA GATGCGCCAC
CTCGCGTCGA AAGGGATCCG CGTGACCGAG CAGGACGCCG AGGCCGTCGG GGAGCGCTCT
GGTCGAGCGG AAGACGACGC AGGCGACGAG TAA
 
Protein sequence
MTTEDDAEAG GDDAGDQPET VTVADVYDAI DAVGKPHLTP AEVAAKTGLT ADEAREALER 
LGEDAELERQ DVSGAEAVYY PPDLDAVTDR ERVILFPDRH EVVVEHADQF TRAQLSQFAH
LVDTNRAGGA IYEIREEDVW QAPYESLDEL LATIHDVVGE RSEHLEEWVR SQWERARKFR
LVTHEDGYTV LEAENDDLMG NVARQKLDDD VLRAPISDSE SWVNEEMTAQ LKRTLYEAGY
PVRDDRDLED GDALSVELGL PLRDYQADWV QRFQEQGSGV FVGPPGSGKT VATMGVMEAV
GGETLILVPS RELASQWRDE LLLHTDLDES QIGEYHGGEK AIRPVTIATY RTAGMDRHRK
LFDERRWGLI VYDEVQHIPA DVARRSARLQ GKHRLGLTAT PVREDDKEEE IFTLVGPPIG
TDWSALFDAG FVQEPEVQIR QIPWSDDEVA DEYVSAVGHG RRQTAATNPA KIDEIRHLLT
EHPHAKALVF VEYLDQGEAI AAELDVPFIS GETRHAERER LFDEFRRNER DTLVISRVGD
EGIDLPDAEL AIVASGLGGS RRQGAQRAGR TMRPVGDAQL YLLATRGTEE EDFVRQQMRH
LASKGIRVTE QDAEAVGERS GRAEDDAGDE