Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_3146 |
Symbol | |
ID | 8412699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 3031288 |
End bp | 3033180 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645021493 |
Product | type III restriction protein res subunit |
Protein accession | YP_003178958 |
Protein GI | 257389185 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0164842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACAG AGGACGACGC CGAGGCCGGC GGTGACGACG CGGGCGACCA GCCCGAGACG GTGACCGTCG CCGACGTGTA CGACGCCATC GACGCGGTCG GCAAACCACA CCTCACCCCG GCGGAAGTGG CCGCCAAGAC CGGACTCACC GCCGACGAAG CCCGCGAGGC GCTTGAACGG CTGGGCGAAG ACGCGGAACT GGAGCGCCAG GACGTGAGCG GCGCAGAGGC GGTCTACTAC CCGCCGGATC TGGACGCGGT GACGGATCGG GAGCGCGTGA TCCTCTTCCC CGACCGCCAC GAGGTCGTCG TGGAACACGC GGACCAGTTC ACCCGGGCAC AGCTCTCGCA GTTCGCCCAC CTCGTCGACA CGAACCGCGC CGGCGGTGCC ATCTACGAGA TCCGCGAGGA GGACGTGTGG CAGGCACCCT ACGAGTCCCT CGACGAGCTG CTGGCGACGA TCCACGACGT GGTCGGCGAG CGCTCCGAAC ACTTAGAGGA GTGGGTTCGG AGCCAGTGGG AACGCGCCCG GAAGTTCCGG CTCGTCACCC ACGAGGACGG CTACACCGTC CTCGAAGCCG AGAACGACGA CCTGATGGGC AACGTCGCCC GCCAGAAGCT CGACGACGAC GTGTTGCGCG CGCCGATTTC GGACTCGGAG TCGTGGGTCA ACGAGGAGAT GACCGCCCAG CTGAAACGGA CGCTGTACGA GGCCGGCTAT CCCGTCAGAG ACGACCGCGA TCTCGAGGAC GGCGACGCGC TGTCGGTCGA ACTGGGGCTT CCCCTGCGGG ACTACCAGGC CGACTGGGTA CAGCGCTTCC AGGAGCAGGG GTCGGGCGTG TTCGTCGGCC CGCCGGGATC GGGCAAGACC GTCGCGACGA TGGGCGTGAT GGAGGCGGTC GGCGGCGAGA CGCTGATTCT CGTGCCGTCG AGGGAATTGG CGAGCCAGTG GCGCGACGAA CTCCTCCTGC ACACGGATCT CGACGAGAGC CAGATCGGCG AGTACCACGG CGGCGAGAAG GCGATCCGAC CGGTGACGAT CGCGACCTAC CGCACCGCCG GGATGGACCG CCACCGCAAG CTGTTCGACG AACGGCGCTG GGGACTGATC GTCTACGACG AGGTCCAGCA CATCCCCGCC GACGTGGCCC GCCGGAGCGC CCGCCTGCAG GGCAAACACC GCCTCGGGCT GACCGCGACG CCGGTCCGCG AAGACGATAA GGAAGAGGAG ATCTTCACGC TCGTGGGCCC GCCGATCGGC ACGGACTGGT CGGCGCTGTT CGACGCCGGC TTCGTCCAGG AGCCGGAGGT CCAGATCCGC CAGATTCCCT GGAGTGACGA CGAAGTGGCC GACGAGTACG TCTCCGCGGT GGGCCACGGC CGCCGCCAGA CCGCCGCGAC GAACCCCGCG AAGATCGACG AGATCCGCCA CCTCCTGACC GAGCACCCCC ACGCGAAGGC GCTCGTCTTC GTCGAGTACC TCGACCAGGG CGAGGCCATC GCCGCAGAGC TCGACGTCCC TTTCATCAGC GGGGAGACCC GCCACGCCGA GCGCGAGCGC CTGTTCGACG AGTTCCGACG CAACGAGCGG GACACGCTCG TGATCTCCCG GGTCGGCGAC GAGGGGATCG ACCTCCCGGA CGCCGAACTG GCCATCGTCG CCTCGGGACT GGGTGGGTCC CGCCGCCAGG GCGCCCAGCG AGCGGGCCGG ACGATGCGCC CCGTCGGCGA CGCGCAACTG TACCTGCTGG CGACCCGTGG GACCGAAGAG GAGGACTTCG TCCGCCAGCA GATGCGCCAC CTCGCGTCGA AAGGGATCCG CGTGACCGAG CAGGACGCCG AGGCCGTCGG GGAGCGCTCT GGTCGAGCGG AAGACGACGC AGGCGACGAG TAA
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Protein sequence | MTTEDDAEAG GDDAGDQPET VTVADVYDAI DAVGKPHLTP AEVAAKTGLT ADEAREALER LGEDAELERQ DVSGAEAVYY PPDLDAVTDR ERVILFPDRH EVVVEHADQF TRAQLSQFAH LVDTNRAGGA IYEIREEDVW QAPYESLDEL LATIHDVVGE RSEHLEEWVR SQWERARKFR LVTHEDGYTV LEAENDDLMG NVARQKLDDD VLRAPISDSE SWVNEEMTAQ LKRTLYEAGY PVRDDRDLED GDALSVELGL PLRDYQADWV QRFQEQGSGV FVGPPGSGKT VATMGVMEAV GGETLILVPS RELASQWRDE LLLHTDLDES QIGEYHGGEK AIRPVTIATY RTAGMDRHRK LFDERRWGLI VYDEVQHIPA DVARRSARLQ GKHRLGLTAT PVREDDKEEE IFTLVGPPIG TDWSALFDAG FVQEPEVQIR QIPWSDDEVA DEYVSAVGHG RRQTAATNPA KIDEIRHLLT EHPHAKALVF VEYLDQGEAI AAELDVPFIS GETRHAERER LFDEFRRNER DTLVISRVGD EGIDLPDAEL AIVASGLGGS RRQGAQRAGR TMRPVGDAQL YLLATRGTEE EDFVRQQMRH LASKGIRVTE QDAEAVGERS GRAEDDAGDE
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