Gene Hmuk_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3112 
Symbol 
ID8412665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2988453 
End bp2990405 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content67% 
IMG OID645021459 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003178924 
Protein GI257389151 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.579534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACA TTGCAGCGGG GCCAGACCAG AACCACAGTC GACGAAGCTG GGGAGCGACG 
CTCCGAGAAT TCGTCGAGTA CATTCCGAGC GGCGACACGA TTCCAGACGA GACGTGGCGT
GGACGCCACC GGAACGTGCT CCGCTTGCTG GTGGCACACG TGCCCGTCCT GCTGGCACTC
GGTCTCGCCG ACGGGACGGA GTCGATGGTG ACCGGTGCGC AGTTGCCAGA GATTCCGGTC
ACGCACGTCC TGGCGGAAGT CGGCGTCGTC GTCACGCTGG CGATCGCAGC GTGGCTGGCG
CTGTTCAAGC GGCGAACTCG GACCGCGCTC GCGACTCTGG GGCTCGTGAC GACCTCGGGA
TTCCTGGTTC ACTTCTCGGG GGGCTACATC GAGGCGCACT TCCACTTTTT CGTCGTGATG
GCCGTCGTCG CCGTCTACGA GGACTGGCTC CCCTTCGTTC TGGGGATCGG GTACGTCGCG
CTCCAGCACG GCTACTTCGG CATGATCGAT CCGAGTCGGG TGTACAACCA CGCTGCCGCG
ATCAACAACC CCTGGGCCTG GGCGTTCATC CACGCCGCGT TCGTGCTGGG CCTGGCCGCC
GCACTGATGG CACACTGGTA CTCGACCGAG CGGTCCCGAG AGCAGGCCCA AGAGCAGCTG
CGGCAGGCCC GCGAAAAGAC CGAAGAGATC GAGGATCTGG AGGCGAAACA GGCCGAGATC
GAGCGCGCGA AAGCCGAGGC CGAGGAGGCG AGAGCAGCGG CCGAGGCCAA ACGCGACGAG
GTCGAGCAGC TGTACGAGCG ACTGGAGGCC GACGCCGACG ACTGCAGCGC AGCGATGGCA
CGAGCGGCAA ACGGCGACCT CACCGTGCGC CTCGAAACCG ACAGCGACAG CGAAGCGATG
GCCCAGATCG CGGTCTCGTT CAACGAGATG ATCGCAGAGA CCGAAGCGAC GATACAGGAG
ATCCAGTCGT TCGCCCAGGA GGTCGCGGAC GTCAGCATGC AAGCAAACGC CAGCGCCGAC
GAGGTCAAGC AGGCCAGCGA GGGCATGAGC GGCTCGATAC AGGAGATCGC GAGCGGCGCG
AGCGAACAGC GCGAGCGGCT CGCCAGCGTC GCCGACGAGA TGACCGACCT CTCGGCGACG
GTCGAAGAAG TGGCCGCATC GGCCGAGACG GTCGCCGACA GTTCGCGCGA GACCGCCGAG
ATCGCCGAGG CCGGCGAGAC GACCGCACGA CGAGCGATCG AGAACGCACG CGAGGTCCAG
GCCGCCATCG ACGAGACGGT CGACAACGTC GAACTTCTCG ACGAGCAGAT GGCAGAGATC
AGCGAGATCG TCGAGCTGAT CGGCGACATC GCCGAGCAGA CGAACATGCT GGCGCTCAAC
GCCAACATCG AGGCTGCTCG TGCCGGCGGC GAGAGCGGGA CCGGTGGCGG TGGGGGGTTC
GCCGTCGTCG CCAACGAGGT CAAGCAACTG GCCGAGGAGA CCCAGGAGTC GGCCGCCGAG
ATCGAACAGC GGATCGAACG GACCCAGAGC CAGACCGACG CGACCGTCGA AACGGCCCGC
AGCGCCGAAG CGGACATGCA GTCGGAGGTC GAGGCCGTCG AAGCGGTCGC CGAGTCGTTC
CGGCAGGTCG CCGAAAACGC CGAGCAGACC GACGACGGCA TCCAGCAGAT CAGCGAGACG
GCCGACGATC AGGCGGCCAG CACCGAGGAA GCCGTCTCGA TGGTCGAAGC GGTCGCAGAC
ATCAGCGAGT CGACGGCGGA CGAGACCGAG AGCGCGTCCG CGGCGGCCCA GCAACAGGCC
GCGTCGATGA ACCAGGTCAG CACCAGCGTC GAGGCCCTCA GCGAGCAGAC CGAGCGCCTC
CAGACGCTCC TGGGGAAGTT CGAGGTGAAC GCGACGGCGA CGGACGGCGG GACCGACGCA
GGAACGGGCG ACCGCGACGC CGGCCGTCGC TGA
 
Protein sequence
MADIAAGPDQ NHSRRSWGAT LREFVEYIPS GDTIPDETWR GRHRNVLRLL VAHVPVLLAL 
GLADGTESMV TGAQLPEIPV THVLAEVGVV VTLAIAAWLA LFKRRTRTAL ATLGLVTTSG
FLVHFSGGYI EAHFHFFVVM AVVAVYEDWL PFVLGIGYVA LQHGYFGMID PSRVYNHAAA
INNPWAWAFI HAAFVLGLAA ALMAHWYSTE RSREQAQEQL RQAREKTEEI EDLEAKQAEI
ERAKAEAEEA RAAAEAKRDE VEQLYERLEA DADDCSAAMA RAANGDLTVR LETDSDSEAM
AQIAVSFNEM IAETEATIQE IQSFAQEVAD VSMQANASAD EVKQASEGMS GSIQEIASGA
SEQRERLASV ADEMTDLSAT VEEVAASAET VADSSRETAE IAEAGETTAR RAIENAREVQ
AAIDETVDNV ELLDEQMAEI SEIVELIGDI AEQTNMLALN ANIEAARAGG ESGTGGGGGF
AVVANEVKQL AEETQESAAE IEQRIERTQS QTDATVETAR SAEADMQSEV EAVEAVAESF
RQVAENAEQT DDGIQQISET ADDQAASTEE AVSMVEAVAD ISESTADETE SASAAAQQQA
ASMNQVSTSV EALSEQTERL QTLLGKFEVN ATATDGGTDA GTGDRDAGRR