Gene Hmuk_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3100 
Symbol 
ID8412653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2978679 
End bp2979353 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content67% 
IMG OID645021447 
Producthalocyanin domain protein 
Protein accessionYP_003178912 
Protein GI257389139 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID[TIGR03102] halocyanin domain 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGGC GGGAGTTTGT CCGGACTGCC GGAGGTGTCG CTGGGGCCTC CGCGGCCGCC 
AGCGCCACCG GTGCTGCCGT CGCCCAGGAG GAGGAAGGCG GCGACGGCGG CGGCGGTGGC
GGCACACCGG ACTACGGCGA CTGGTTAGGC AGCGTGAGCA ACTTCGACGG CGAGACCGTC
GACGCCACGG GGCAGGACTC GACGACCGTC GAGGTCGGCG TCCAGGCAAA CGGCGGTGCC
TTCGGCTTCG GGCCAGCAGC GGTCCACGTC GACAACGGTG CGACCGTCCA GTTCGAGTGG
ACCGGCGAAG GCGGCCGACA CAACGTCGTC TCCGACGGCG ACGGACCGCT CGACTCCGGC
GACGCCGTCG ACACGACCGG CGTCGAGTAC GAGCACACCT TCGAAGAGGA CGGTATCTAC
CCGTACTACT GTGTGCCCCA CAAGAGCCTC AACATGAAAG GTGCCATCGT CGTCGGCTCC
GACTACCCCA CGGCTGACTC CGGCGGCGAC GGCGGCGGTG AAGTCGAGAC CCTCGATCCC
GAGGAAGCCG GTGTGCCGAT CCAGCCCCAC TGGGTCGGTA TCGGTGCAGG ACTCGCGATG
GTCGTCTCGA CGATCTTCAC GTTCTACCTG CTGAAGTACG GTGAATCGGC GAACACCAAA
GGAGGGAACA ACTGA
 
Protein sequence
MNRREFVRTA GGVAGASAAA SATGAAVAQE EEGGDGGGGG GTPDYGDWLG SVSNFDGETV 
DATGQDSTTV EVGVQANGGA FGFGPAAVHV DNGATVQFEW TGEGGRHNVV SDGDGPLDSG
DAVDTTGVEY EHTFEEDGIY PYYCVPHKSL NMKGAIVVGS DYPTADSGGD GGGEVETLDP
EEAGVPIQPH WVGIGAGLAM VVSTIFTFYL LKYGESANTK GGNN