Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_3100 |
Symbol | |
ID | 8412653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 2978679 |
End bp | 2979353 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645021447 |
Product | halocyanin domain protein |
Protein accession | YP_003178912 |
Protein GI | 257389139 |
COG category | [C] Energy production and conversion |
COG ID | [COG3794] Plastocyanin |
TIGRFAM ID | [TIGR03102] halocyanin domain |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGGC GGGAGTTTGT CCGGACTGCC GGAGGTGTCG CTGGGGCCTC CGCGGCCGCC AGCGCCACCG GTGCTGCCGT CGCCCAGGAG GAGGAAGGCG GCGACGGCGG CGGCGGTGGC GGCACACCGG ACTACGGCGA CTGGTTAGGC AGCGTGAGCA ACTTCGACGG CGAGACCGTC GACGCCACGG GGCAGGACTC GACGACCGTC GAGGTCGGCG TCCAGGCAAA CGGCGGTGCC TTCGGCTTCG GGCCAGCAGC GGTCCACGTC GACAACGGTG CGACCGTCCA GTTCGAGTGG ACCGGCGAAG GCGGCCGACA CAACGTCGTC TCCGACGGCG ACGGACCGCT CGACTCCGGC GACGCCGTCG ACACGACCGG CGTCGAGTAC GAGCACACCT TCGAAGAGGA CGGTATCTAC CCGTACTACT GTGTGCCCCA CAAGAGCCTC AACATGAAAG GTGCCATCGT CGTCGGCTCC GACTACCCCA CGGCTGACTC CGGCGGCGAC GGCGGCGGTG AAGTCGAGAC CCTCGATCCC GAGGAAGCCG GTGTGCCGAT CCAGCCCCAC TGGGTCGGTA TCGGTGCAGG ACTCGCGATG GTCGTCTCGA CGATCTTCAC GTTCTACCTG CTGAAGTACG GTGAATCGGC GAACACCAAA GGAGGGAACA ACTGA
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Protein sequence | MNRREFVRTA GGVAGASAAA SATGAAVAQE EEGGDGGGGG GTPDYGDWLG SVSNFDGETV DATGQDSTTV EVGVQANGGA FGFGPAAVHV DNGATVQFEW TGEGGRHNVV SDGDGPLDSG DAVDTTGVEY EHTFEEDGIY PYYCVPHKSL NMKGAIVVGS DYPTADSGGD GGGEVETLDP EEAGVPIQPH WVGIGAGLAM VVSTIFTFYL LKYGESANTK GGNN
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