Gene Hmuk_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3087 
Symbol 
ID8412640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2967391 
End bp2969154 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content65% 
IMG OID645021434 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain protein 
Protein accessionYP_003178899 
Protein GI257389126 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAG ACCTCAACTG GGCCATCGGC GGCGAAGCCG GCGATGGAAT CGACTCTACC 
GGGAAGATCT TCGCCCAGGC ACTCTCACGG GCAGGTCGAC ACGTCTTCAC GTCCAAGGAC
TTCGCGTCGC GTATCCGCGG TGGGTACACG GCCTACAAGG TCCGGACAGC TGTCGACCGC
GTCGAGAGTG TCGTCGACAG ACTGGACGTA CTCATCGCAC TGACAGAGCG CACCATCGAC
GAGAACATGA ACGAGCTCCA CGATGGCTCG GTCATCATCT ACGACGGGGA GCGGACGACG
ATGCAGAACG TCGAGATCCC CGACGAGATG ATCGGTCTCG AAGTGCCGCT CAAGCGACTC
GCCGAAGAGG CCGGCGGCGC GATCATGGCC AACGTCGTCG CCCTCGGTGC AGCCTGTGAA
GTGACCGGCT TCCCCATCGA GAACTTAGAC GAGTCCCTGG AGAAGCGCTT CGGCGACAAA
GGCGAGGCGA TCGTCGAGAA CAACAAGAAG GCGGCCCGCG CCGGCCAGGA GTTCGTCCAG
GAGGAGTACG ACCACGACTT TGGCTACTCG CTGGAGACGA CCGACAACGA TTACGTCCTG
CTCAACGGTG ACGAGGCCAT CGGCATGGGC GCGATCGCCG CTGGCTGTCG GTTCTACTCC
GGCTACCCGA TCACGCCCGC GACGGACGTG ATGGAGTACA TGACCGGCCG CGTCGACCAG
TTCGGTGGCA AGGTCGTCCA GGCCGAGGAC GAACTCGCCG CGATCAACAT GGCGCTTGGC
GCTGCCCGTG CCGGCGCACG AGCGATGACG GCCACGTCCG GCCCCGGGAT CGACCTGATG
ACCGAGACCT TCGGGCTCGT CGCGACCACC GAGACGCCGC TGGTGATCTG TGACGTGATG
CGCTCTGGCC CCTCCACGGG GATGCCGACC AAGCAGGAAC AGGGCGACCT CAACATGGCG
CTGTACGGCG GCCACGGCGA GATTCCGCGG TTCGTCGTCA CGCCGACGAA CATCTCGGAG
TGCTTCTGGA AGACCGTCGA AGCGTTCAAC CTCGCCGAGA AGTACCAGAC GCCGGTCTTC
CTCGTGTCCG ACCTCGCGCT GGCAGTGACC GAACAGACGT TCGCGCCCGA GACCTTCGAC
ATGGACGAGG TCGAGATCGA GCGCGGCAAG GTCGTCGACG AGGACGATAT CGACGGCTGG
CAAAACGAGA AAGACCAGTT CCAGCCACAC TTCCCCGCCG CCGACGGCGT CTCGCCCCGT
ACCTTCCCCG GGACGAGCGG CGGCGCACAC ATGACGACCG GCCTCGAACA CGACGCGCTC
GGTCGCCGCA CCGAAGACAC CGAGGTCCGC GAGGAACAGG TCGAGAAGCG CGAACGCAAG
GTCGAGACCG CCCGCGAACA GGAAGACTGG GACTACCGCG AGTTCGGCGA TCCCGACGCC
GACACGCTGG TCGTCTCGTG GGGCTCGAAC GAGGGCGCGA TGCGCGAAGG ACTGGAGATG
CTCGCCGAGG ACGGCCTCGA CGTGCGCTTC GTCTCGGTGC CCTACATCTT CCCGCGGCCC
GACCTCAGCG AGGAGATCGA GGCCGCAGAG CAGACGATCG TCGTCGAGTG TAACGCCACC
GGGCAGTTCG CCGACGTGAT CGAACACGAC GTGCTCGAAC GCGTCGACCG CGTCAACAAG
TACGACGGCG TCCGCTTCAA GGCCGACGAA CTGGCCGAAG AGATCAAAGA CGCGGTCGCC
GAGGAGACAG AGGTGTCAGC ATGA
 
Protein sequence
MPEDLNWAIG GEAGDGIDST GKIFAQALSR AGRHVFTSKD FASRIRGGYT AYKVRTAVDR 
VESVVDRLDV LIALTERTID ENMNELHDGS VIIYDGERTT MQNVEIPDEM IGLEVPLKRL
AEEAGGAIMA NVVALGAACE VTGFPIENLD ESLEKRFGDK GEAIVENNKK AARAGQEFVQ
EEYDHDFGYS LETTDNDYVL LNGDEAIGMG AIAAGCRFYS GYPITPATDV MEYMTGRVDQ
FGGKVVQAED ELAAINMALG AARAGARAMT ATSGPGIDLM TETFGLVATT ETPLVICDVM
RSGPSTGMPT KQEQGDLNMA LYGGHGEIPR FVVTPTNISE CFWKTVEAFN LAEKYQTPVF
LVSDLALAVT EQTFAPETFD MDEVEIERGK VVDEDDIDGW QNEKDQFQPH FPAADGVSPR
TFPGTSGGAH MTTGLEHDAL GRRTEDTEVR EEQVEKRERK VETAREQEDW DYREFGDPDA
DTLVVSWGSN EGAMREGLEM LAEDGLDVRF VSVPYIFPRP DLSEEIEAAE QTIVVECNAT
GQFADVIEHD VLERVDRVNK YDGVRFKADE LAEEIKDAVA EETEVSA