| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_3050 |
|---|
| Symbol | |
|---|
| ID | 8412603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2936390 |
|---|
| End bp | 2937283 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645021397 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003178862 |
|---|
| Protein GI | 257389089 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.861172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.107005 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTCG CCATCCTCGG CTGTGGCTAC GTCGGGCTGG CTCTCTGTCG CCAGCTGACC
GACGCGGGCC ACGACGTGGT CGGTGTGCGC CGCTCTCCAG ACGCCGCGGC GGCGATCGAG
GACGCCGGTG GCACGGCGGT CCGGGCCGAC GTGACCGACG CCGACGACCT CGCTGCCGTC
CCCGACGTAG ACGCGGTCGT CTTCGCTGCC AGTTCCGGCG GGCGGGGAGC CGACGCGGCG
CGCCGGGTGT ACGTCGAGGG CCTCCAGACG GTGATCGACC ACTTCGGAGC GCGCGACGAT
CCGCCAGCGC GGCTCGTGTA CACGTCCAGT ACGGGCGTGT ACGGCGACCA CGACGGCGAC
TGGGTCGACG AAACGACGCC GCTCGACCCC CAGACCGACA AGACGCGGGT CCTCGCCGAG
GCCGAGCGCA TCGCCAGAGA GCGGGCACTG GACCGCGGCA TCGACGGGAC CGTCGCCCGC
TTTGCCGGAC TGTACGGCCC CGACCGGTAC CGCCTGGAGC GGTACCTCGA CGGCCCCGTC
ACCGAGGGGT ACCTGAACAT GGTTCACCGC GCGGACGCGG CGGGCGCGGT CGCGTTCCTC
CTCCGCGAGG GAGTGGCTCG GGACGAGACC GTGCTGGTCG TCGACGACGA ACCGGTCTCG
AAGTGGGCCT TCGCCGACTG GCTGGCCGAC GAGTGTGGCG TCGCGGAGCC ACCCAAACGA
ACCACGGCCG AGCGCCTCGC GGACGACGAC CTCTCGGAGA CCGCGCGTCG CCGGATCCAG
ACGAGCAAGC GCTGCTCGAA CGACCGACTG CACTCGCTGG GCTACGAGTT CGCCCATCCG
ACCTTCCGGT CGGGGTACCG CGACGCGATC GAGCGCTACC GGGCCGCGAA CTGA
|
|---|
| Protein sequence | MRVAILGCGY VGLALCRQLT DAGHDVVGVR RSPDAAAAIE DAGGTAVRAD VTDADDLAAV
PDVDAVVFAA SSGGRGADAA RRVYVEGLQT VIDHFGARDD PPARLVYTSS TGVYGDHDGD
WVDETTPLDP QTDKTRVLAE AERIARERAL DRGIDGTVAR FAGLYGPDRY RLERYLDGPV
TEGYLNMVHR ADAAGAVAFL LREGVARDET VLVVDDEPVS KWAFADWLAD ECGVAEPPKR
TTAERLADDD LSETARRRIQ TSKRCSNDRL HSLGYEFAHP TFRSGYRDAI ERYRAAN
|
|---|
| |