Gene Hmuk_3025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3025 
Symbol 
ID8412578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2911398 
End bp2912222 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content68% 
IMG OID645021372 
ProductABC-2 type transporter 
Protein accessionYP_003178837 
Protein GI257389064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.130817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.019296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGAC AGCCAGCCAG TGAGACGCCG AGCGGCGGGG AGACGCCCCG TCGGGCTTCC 
TACTACCACC TCGCGAGGGC CGTCCTCGTC CGTGAGTTCC TGCTGTTCGT GCGCTACCCG
GCCAACGCCC TCGGCGGGAT CGTCGTCTCG CTTTTCTTCT TCGGGCTGCT GTTCTACGGC
GGGCGGATGA TCGCCGGACA GGCGCTGACC GACTCGCTGG AGGGGATCGT CGTCGGCTAC
TTCCTGTGGA CGCTCGCGGT CGGTGCCTAC TCCTCGATCT CGAACGACAT CGGCAGCGAG
GTCCAGTGGG GGACCCTGGA GCGCCACATC ATGACGCCCT TCGGTTTCGC GCCGGTCGCG
CTGTTGAAAG GCGTCGCGAA GGTCGTCCGG ACCTTCCTCA CGTCGGCGGT GATCCTCGCG
GTCATGCTCC TGCTCACCGA TACCACCCTC CAGTTGCCGG TCGTCACGAT CACGGTCGTC
GCCGCGCTAG CGGTCGCCTC CGTGCTGGGA CTTGGCTTCG CGGCCGGCGG CGTCGCCGTC
CTCTACAAGC GCATCGGCAA CTGGCTGAAC CTCCTTCAGT TCGGATTCAT TCTGCTGATC
TCGGCCCCGG CGTTCGACCT CGGGTGGACG AAGTTCCTCC CGCTGGCACA GGGCAGCGCG
CTCCTCCAGC GGGCGATGAT CGACGGGACG CGGCTGTGGG AGTTTCCCGC CGTCGACCTG
CTGGTCCTCG TCGGCGTCGC CGTGGGCTAC GTCGTGCTCG GCTACGCCGC CTTCGAGGCC
GCGACGCGGC GAGCCCGACG GCTCGGGGTG CTTGGCGACT ACTGA
 
Protein sequence
MTGQPASETP SGGETPRRAS YYHLARAVLV REFLLFVRYP ANALGGIVVS LFFFGLLFYG 
GRMIAGQALT DSLEGIVVGY FLWTLAVGAY SSISNDIGSE VQWGTLERHI MTPFGFAPVA
LLKGVAKVVR TFLTSAVILA VMLLLTDTTL QLPVVTITVV AALAVASVLG LGFAAGGVAV
LYKRIGNWLN LLQFGFILLI SAPAFDLGWT KFLPLAQGSA LLQRAMIDGT RLWEFPAVDL
LVLVGVAVGY VVLGYAAFEA ATRRARRLGV LGDY