Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2996 |
Symbol | |
ID | 8412549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 2878745 |
End bp | 2879695 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645021343 |
Product | HTR-like protein |
Protein accession | YP_003178808 |
Protein GI | 257389035 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.691032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACC TCTCGCCACC CGAGGCCAAG AGCGTCAGTG CGGGAGTCGA GTACGTCCCG TTCGGCATCC CGGGACTGGA CGGTGCCGTC AGAGGTATCC CGACCGGTAG CGCAGTGCTG CTCGCGGGCG CACCCGACGC CGGCAGCCAC GCCTTCCTGT ACACGAGCCT CGCCTCGCTC GCGCTCGCGA AACACGAGCC GGCGCTGTAC CCCCGACGGC TCGGCGACGC GCGCGAGGCG ATCCCCGAGC GCGTCAGCTA CGTCTCGTTG ACTCACGACC GGGAACACAT CTACAGCGAA CTCGACGCCG TCCTCGACTC CGAGCAGTTC GAGATCCTGA CCGACCACCT CACCGTCGCC GACTTCTCCC AGCAGTTCCT CTCGGCCGTC GACGTGCCCG CGTCGCTGTA CGACCAGCGC CGCGAGGACG TGCCCGCGCC GACCGAAGAC GACGACAGCG GGGTCGCCGG GCTGCTCGAC GACGTGACGC TGCCGGACGA GCGCTCGACG GAGACCGACG ACGCCGACGA CGTGTCCGCC TTGCTCGACG AGATCAGCGA GTACGTCGCC GACAGCGGCG ACGACGCGAT CCTCGTGATC GACGGGCTCT CGGACCTCCT CCTGGCGACG AACTTCGGGC TCGATCGCAG CGCCGTGCTC GGCTTCCTGC TGGGGTTGCG CGAAGCGGTC GTCGGCTGGG ACGGGATCGC CTACGTGGTC TACGAACGCC GGGCCGCCGA CGTGCGGAGC GATCCCGACA TCCACGGACT GCTCCACGGC TCGGTCTTCT TCTACTCGAA CGACCAGGGT CACGACACGT ATCGGACCAT GCGCGTCGGC TCTTTCGGCG GCGCGCTGGA CACCGAACGC CAGACGGTCT TCGAGAGTTC GGTCGGTCCG GCCGGCCTCC GGGCGAAGGC GACCAAGAAG ATCGGCCCGT CGAACTGGTA G
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Protein sequence | MDDLSPPEAK SVSAGVEYVP FGIPGLDGAV RGIPTGSAVL LAGAPDAGSH AFLYTSLASL ALAKHEPALY PRRLGDAREA IPERVSYVSL THDREHIYSE LDAVLDSEQF EILTDHLTVA DFSQQFLSAV DVPASLYDQR REDVPAPTED DDSGVAGLLD DVTLPDERST ETDDADDVSA LLDEISEYVA DSGDDAILVI DGLSDLLLAT NFGLDRSAVL GFLLGLREAV VGWDGIAYVV YERRAADVRS DPDIHGLLHG SVFFYSNDQG HDTYRTMRVG SFGGALDTER QTVFESSVGP AGLRAKATKK IGPSNW
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