Gene Hmuk_2977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2977 
Symbol 
ID8412530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2859086 
End bp2861083 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content70% 
IMG OID645021324 
ProductNHL repeat containing protein 
Protein accessionYP_003178789 
Protein GI257389016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0272113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCC GCCACCAGGC GACCGTCGGC GCGTACGAGA CGAACGGGGA CCGGGCAGAC 
GACTCGCCGC AGCTGACCAC GCCGGTCGGC GTGTGCCAGG ACCCGCGCGG GAACGTGTGG
GTCGCGGACA CCGCGAACAG TCGGCTCGTC GTCCTCGACA GCGCCCTGGA ACAGCATCTG
ACGGCCGTCG GCGAACCGGG ATCGGAACCG GGATCGTTCG AACTGCCCTT CCGGCTCGCC
CACCACCCGA GCGATCGGGC GCTGTTCGTG ACGGATCTGG CCAACGGCCG GGTCCAGCGG
TTGTCCTACG AGTACGACGG TCGACGGCCG GCGGTCGTCG CCGTCGACAC CTTCCGGCCG
GACGACGGGG AGCGCTTTCA CCCCAACGGC ATCGCAGTCT ACGAGTACGA CGACGGGCTC
CGGGTGTTCG TCGCCGACGA GTTCTACCAC GACGGCGACG ACCTCCGTTC GCGGATCGCG
GTCTTCGACG ACGAGGGGGC GCTCGTCGAC ACGATCCGGT CGGTCGACTC CGAGTTCGCC
GGTGCGCTCC CGCTGTACTG GCCACAGGGG TTGGCCGTCG ACACCGCGGG GAACCTCCTG
ATCGCGAACA CGGGAGAGGG CGTGTTGCGC CGGACCGGCG CGTTCCCCTC GTACTTCGCG
ACGGTCCTTC GCTGTGACCG GGCCGGCGTT GGCGTCCCCT TCGAGGAGAC GGGGCTGCCG
ATCGTTCCGC AGTCGTACGT CACGCCGCGG GGCGTCTCCG TGCTTGGCAG CGGGGACGAC
GAGCGCGTCG CCGTGCCGGA CGTAGGCGGT GGCTTCGTCC ACATGTACGA CACCGCGCGG
GGGCACACGA GCGAAGTCCC CTCGACGATC GCGCCGAGCT TAGACGACCG GCGGTTCGGG
TCGCCGATGC AGGTCGCCCC CTACGACTCG CCGGACGGCA CCGCGACCGA CGACACGACC
GAGCGGGTCC TGATCACCGA GGCGATGGAC CACACCGTCG CCGCCTACGA GCTGGGGACC
ATCTCCGAGT CGAAGCGACG GCTGGCCGGC GTCGGCGGCG ACCACACCGC GCCCGAGCGG
CTGTCCTTCG CCAGCGCGGC CGTCGGCGTC CCCACGGTGG GCGGCGAGCG ACTGCTCGTC
GTCGACGCCG ACAACGCTCG GCTCCAGGTG ACCGACGCCG ACGGCGGCGG ACCACTGGTC
CAGCGACCGC TCTCGCACAA CCGTTTCCCG GTCGGAACGG CGTTCTGGTC GGTCGAGCCC
GGCCGGGGAT ATCTCTTCGC GGCCGACTAC TCGCTGACCT ACGACACGGA CAACGACGAG
CCACAGATCG CCGTCTACCG GCTCGACTGC CGGGAAGGAG TTCGGATCGA ACACGTCACG
TCGGCCGCCA CCTGGGGCAT CTGGGGGAAC AACTGCAAGC TGCCCCGAGG GCTGGCGACC
GACGAGATCG ACGGCGACCG GACCCGCCTG CTCGCGGTCG ACTCCTTCAA CGGCCGGCTG
CTCCGGTGGA CCTTCGACCG GACGACCGGT GAACTCGACT ACGAGGCCGA CGACGGTCGC
TTCGGGCACG ACCCCGGCGA GTTCTGGAAC CCCAGCGACG TGGCCGTCGG CGAGCGCGCG
ACCTACGTCA CCGACCGGAA CAACAACCGA CTCCAGTACC GCGACGACGA CGGGTGGCAC
GTCTACGGCG GGGCCGGCTA CGGCACCGAC GGCGATCGAT TCCTGTTACC CCAGAGCGTC
GCCGCCGCCG ACGGATACGT CTTCGTCGTC GATCTGGTCG ATCGCGCGAT CAAGGCCTAC
AGCGAGACCG ACGCAGACGA GGACGAAGCG CTGGCGTTCG TGGACGCGAT GCAGGCCTTC
GGCGGTGACC GCGGCCGGGG CGACCTCTGG ATGCCGTCCC TGCTGTCGGC GAGCGGGCGC
GAGGACGGCG TCGAACTGGT CGTTCCCGAT TCCGTGCTCG GCGTCGCCTA CCGGTACCAC
TGGACGCCCC CGGCGTGA
 
Protein sequence
MPFRHQATVG AYETNGDRAD DSPQLTTPVG VCQDPRGNVW VADTANSRLV VLDSALEQHL 
TAVGEPGSEP GSFELPFRLA HHPSDRALFV TDLANGRVQR LSYEYDGRRP AVVAVDTFRP
DDGERFHPNG IAVYEYDDGL RVFVADEFYH DGDDLRSRIA VFDDEGALVD TIRSVDSEFA
GALPLYWPQG LAVDTAGNLL IANTGEGVLR RTGAFPSYFA TVLRCDRAGV GVPFEETGLP
IVPQSYVTPR GVSVLGSGDD ERVAVPDVGG GFVHMYDTAR GHTSEVPSTI APSLDDRRFG
SPMQVAPYDS PDGTATDDTT ERVLITEAMD HTVAAYELGT ISESKRRLAG VGGDHTAPER
LSFASAAVGV PTVGGERLLV VDADNARLQV TDADGGGPLV QRPLSHNRFP VGTAFWSVEP
GRGYLFAADY SLTYDTDNDE PQIAVYRLDC REGVRIEHVT SAATWGIWGN NCKLPRGLAT
DEIDGDRTRL LAVDSFNGRL LRWTFDRTTG ELDYEADDGR FGHDPGEFWN PSDVAVGERA
TYVTDRNNNR LQYRDDDGWH VYGGAGYGTD GDRFLLPQSV AAADGYVFVV DLVDRAIKAY
SETDADEDEA LAFVDAMQAF GGDRGRGDLW MPSLLSASGR EDGVELVVPD SVLGVAYRYH
WTPPA