Gene Hmuk_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2962 
Symbol 
ID8412515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2844141 
End bp2845262 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content67% 
IMG OID645021309 
Productaminotransferase class I and II 
Protein accessionYP_003178774 
Protein GI257389001 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.293014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.586653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTATC AAACGCCCCG GTTCTTCCGG GTGGTCCAGT ACGCGCGGCG CGCCGATCGA 
GACGTGATCG ACATGGTGTC CGGAAGCCCG GACTGGGACC CGCCCGCAGG TATTCGCGAC
GGCCTTCGGG AGTACGCCGA CTTCCCGGCC GACGACTTCC AGTACCTGCC GAGCGACGGG
CTCCCGGAGC TACGCGAGCA CGTCGCCGCC CGGCGCGGAG TCGACCGCGA CCGCGTCATC
GTCACCAACG GAGCCGGCGA AGCCAACCAC CTCGCGATGT TCGGCGGTCT CGAACGGTTC
GGCGGCAACG AGATACTGCT GACCGATCCG GTCTTTCCCT ACTACGCCGG GCGAGCGCAC
TTCCTCGACG CCGATGTCGG GTTCGTACCG GTCGAGGATC GAGGCCACCT CGATCCCGAG
CGCGTCCGAG AACGGGCCAG CGAGGAGACG GCGGTGATCG TCGTCAACAC GCCCAACAAC
CCGACGGGTG CGGTGTACGA CGCCGACGTG ATGGAACGGC TCGTCGAGAT CGCCGAAGTG
AACGACGCCC TGCTGGTCTC GGACGAGGTG TACGACCACT TCGACTACAC CGGCCGGTTC
AGTTCGGCCG TCGAAATCGA CTCGCCCAAC GTCGTCGCCA CCAACTCCTT CTCGAAGGCG
ATGGCGATTA CCGGCCTGCG GGTCGGGTAC GCCATCTTCC CGCCAGAGGA CGGGCCGACC
GGCGACCTGC TCGAACGAGC GCGAACGCGA CACATGCTCA CGAACGTCAC CGGCTCGCGC
CCGGCACAGT ACGCCGTCCT GCGGGCGCTC AAGACGACTG GGCCCGAGTA CTACGCCGAC
ATCCGAGATC GGCTCCGCGA GCGGATCGAC ACGTTCTGTG AGACACTGGA AGCTGCCGGA
GCGGAGTACG ACCGCCCCGA GGGCGGGTTC TACGTGATGG CCCGCTTCGA GGACTACGAC
GGAAGCTTCG ACCACGCCTA CGAACTGATC GACGAGGCCG GCGTCGCGGG AATGCCCGGC
CAGGCCTTCG GCGACTCGCG CAGCGAGTGG TTCCGCTTCG CGCTGATGAC ACCCCGCGTC
GACGAGGCGG CCGACCGACT CGCGGCGTTT TTCTCCCGAT AG
 
Protein sequence
MDYQTPRFFR VVQYARRADR DVIDMVSGSP DWDPPAGIRD GLREYADFPA DDFQYLPSDG 
LPELREHVAA RRGVDRDRVI VTNGAGEANH LAMFGGLERF GGNEILLTDP VFPYYAGRAH
FLDADVGFVP VEDRGHLDPE RVRERASEET AVIVVNTPNN PTGAVYDADV MERLVEIAEV
NDALLVSDEV YDHFDYTGRF SSAVEIDSPN VVATNSFSKA MAITGLRVGY AIFPPEDGPT
GDLLERARTR HMLTNVTGSR PAQYAVLRAL KTTGPEYYAD IRDRLRERID TFCETLEAAG
AEYDRPEGGF YVMARFEDYD GSFDHAYELI DEAGVAGMPG QAFGDSRSEW FRFALMTPRV
DEAADRLAAF FSR