Gene Hmuk_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2928 
Symbol 
ID8412481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2815822 
End bp2816694 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content68% 
IMG OID645021275 
Productaminotransferase class IV 
Protein accessionYP_003178740 
Protein GI257388967 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.213699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATACC ACGTAAACGG CGATCTCGTC CCGGCGAGTG AAGCGACCGT CTCCGTCAGA 
GACCGAGGCT TCCAGTACGG TGACGCGGCC TTCGAGACGA TCAGGGCCTA CGGCGGCGTT
CCCTTCGAGT GGACGGCCCA CCGCGAGCGT CTCCAGCGGA CCGCCGAGAC GCTCGGCTTC
GGCCACGCAG TGCCCGACGG CCTCCGGGAC AGGGTCGACG AGACTCTCGC CGCCAACGAC
CTCGACGACG CCTACGTCAA GCTCTCTGTC ACCCGCGGCG TCCAGCCCGG GACGCTGACG
CCCGACGAGA CCGTCGATCC GTCCGTCGTC GTCGTCGTCG ACGAACTTCC ACGCGGCGGG
ACCGAGGGCC GCTCAGTCTG GGACGGCCCG GCGGACGTAC AGACCGTCAA GACCCGTCGG
GTGCCCGACG CGGCGCTTCC GGCCGACGCC AAGACCCACA ACTACCTCAA CGGAATCCTC
GCTCGGCTGG AACTGCGCCG CGCCGCGACC GACCGCTTCC GGGCCGACGA GGCGCTGTTG
CGCGACACCG AGGGCCGCGT CGTCGAGGGT GCCACCAGCA ACCTCTTTTT CGTCACCGAG
GCCGGTCTAC GAACGCCCGC CAGCGACCTG GACCTGCTAC CGGGCGTCAC CCGCTCGGTC
GTGATGGACC TCGCCGAGTC CGAGGACTTC CCCGTCGAGA CCGGGACGTA CACCGTCGAC
GACGTTCGCG AGGCAGACGA GGCGTTCCTG ACCAACTCGA CGTGGGAGAT CCGGCCCGTC
GCCACCGTCG ACGGTATCGA CGTGGGAACC GGTCCGATGA CGAAACTGCT CCAGCGGCTC
TACGACGAAC GCGTCGAGAG CGAGTGTTAT TAG
 
Protein sequence
MQYHVNGDLV PASEATVSVR DRGFQYGDAA FETIRAYGGV PFEWTAHRER LQRTAETLGF 
GHAVPDGLRD RVDETLAAND LDDAYVKLSV TRGVQPGTLT PDETVDPSVV VVVDELPRGG
TEGRSVWDGP ADVQTVKTRR VPDAALPADA KTHNYLNGIL ARLELRRAAT DRFRADEALL
RDTEGRVVEG ATSNLFFVTE AGLRTPASDL DLLPGVTRSV VMDLAESEDF PVETGTYTVD
DVREADEAFL TNSTWEIRPV ATVDGIDVGT GPMTKLLQRL YDERVESECY