Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2928 |
Symbol | |
ID | 8412481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 2815822 |
End bp | 2816694 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645021275 |
Product | aminotransferase class IV |
Protein accession | YP_003178740 |
Protein GI | 257388967 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.213699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAATACC ACGTAAACGG CGATCTCGTC CCGGCGAGTG AAGCGACCGT CTCCGTCAGA GACCGAGGCT TCCAGTACGG TGACGCGGCC TTCGAGACGA TCAGGGCCTA CGGCGGCGTT CCCTTCGAGT GGACGGCCCA CCGCGAGCGT CTCCAGCGGA CCGCCGAGAC GCTCGGCTTC GGCCACGCAG TGCCCGACGG CCTCCGGGAC AGGGTCGACG AGACTCTCGC CGCCAACGAC CTCGACGACG CCTACGTCAA GCTCTCTGTC ACCCGCGGCG TCCAGCCCGG GACGCTGACG CCCGACGAGA CCGTCGATCC GTCCGTCGTC GTCGTCGTCG ACGAACTTCC ACGCGGCGGG ACCGAGGGCC GCTCAGTCTG GGACGGCCCG GCGGACGTAC AGACCGTCAA GACCCGTCGG GTGCCCGACG CGGCGCTTCC GGCCGACGCC AAGACCCACA ACTACCTCAA CGGAATCCTC GCTCGGCTGG AACTGCGCCG CGCCGCGACC GACCGCTTCC GGGCCGACGA GGCGCTGTTG CGCGACACCG AGGGCCGCGT CGTCGAGGGT GCCACCAGCA ACCTCTTTTT CGTCACCGAG GCCGGTCTAC GAACGCCCGC CAGCGACCTG GACCTGCTAC CGGGCGTCAC CCGCTCGGTC GTGATGGACC TCGCCGAGTC CGAGGACTTC CCCGTCGAGA CCGGGACGTA CACCGTCGAC GACGTTCGCG AGGCAGACGA GGCGTTCCTG ACCAACTCGA CGTGGGAGAT CCGGCCCGTC GCCACCGTCG ACGGTATCGA CGTGGGAACC GGTCCGATGA CGAAACTGCT CCAGCGGCTC TACGACGAAC GCGTCGAGAG CGAGTGTTAT TAG
|
Protein sequence | MQYHVNGDLV PASEATVSVR DRGFQYGDAA FETIRAYGGV PFEWTAHRER LQRTAETLGF GHAVPDGLRD RVDETLAAND LDDAYVKLSV TRGVQPGTLT PDETVDPSVV VVVDELPRGG TEGRSVWDGP ADVQTVKTRR VPDAALPADA KTHNYLNGIL ARLELRRAAT DRFRADEALL RDTEGRVVEG ATSNLFFVTE AGLRTPASDL DLLPGVTRSV VMDLAESEDF PVETGTYTVD DVREADEAFL TNSTWEIRPV ATVDGIDVGT GPMTKLLQRL YDERVESECY
|
| |