Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2920 |
Symbol | |
ID | 8412472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 2803496 |
End bp | 2804707 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645021266 |
Product | SufBD protein |
Protein accession | YP_003178732 |
Protein GI | 257388959 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.689124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTACGC AGGTACACGC AAATCTCACG GCAGAACAGG TAACGCAGAT CTCCGAGGAG CTCGACGAGC CCGAGTGGCT GCTCGAAACA CGTCTCGACG CGTACGAGGC CCTCGACTCG CTGGACATGC CGGACGTGAT CCGGACGCCG GGTCGAGACT GGACGAACCT CGACGCGCTC GACTACGAGA CGCTCGTCGA TCCCTTGGAG TGGGAACAGG AGAAAGACCG CGTCGACGCC GAGAGTGTCG ACGTGCTCTC GTGGGCCGAC GCGCTCGAAC AGCACGGAGA GCTGATCGAA GCGCAGTTCG GCTCGATCGT CGACCCACAG CGGGACTACC TCACGGCACT CTCGACGGCG CTGTTTAGCG CCGGGACGGT CGTCTACGTC CCCGAGGGCG TCGACGCCGA AGACGTGAAG ATCCGGACGA CGATGAACAG CCGATCGCTG TTCAACTACA CGCTGGTCGT CGCCGAGGAG TCCTCGTCCG TGACGATCCT CGAACGCCAG ACCACCGGCA CCAACGTCGA CGGCGAGCAG TACTACTCCG GCGTCGTCGA AGTCGCCGCC GAGGAAAACA GCAGCGTCCA GTACGGCACG CTCCAGAACC TCGACGACGA CAGCTACAAC TTCCAGGTCA AGCGTGGCCA CGCCGACACC TACGCCACGG TCGACTGGAT CGAGGGCAAC ATCGGCTCTC GACTGACCAA GTCCAACGTC GAGACGCGCC TGCTTGGCGA CGCCTCGGAG TCCCAGATCG TCGGGGCCTT CTTCGGCCAC GAGGACCAGC ACTTCGACAT CGCGTCCCGA GTCTGGCACG AGGCCGAACA CACCACGGCC GACCTCGTCA CCCGCGGCGT CCTCGACGAC GCCGCCCGCT CGGTGTACGA GGGCGTCCAG GACGTTGGCC GCGAGGCGTG GGACACCAAC TCCTACCAGC GGGAGAACAC CCTGATGCTC TCAGACGAGA GCGAGGCCGA CGCGTCGCCG AAGCTGATCA TCAACAACCA CGACACAGAA GCCAGCCACT CGGCGACCGT CGGACAGGTC GACGAGGAGG ACATGTTCTA CATGACCTCT CGGAGTGTCG ATCCCGAGAG CGCGGAGAAC ATGCTGGTGG AAGGCTTCTT CGTGCCCGTC TTCGAGGAGA TCGCGGTCGA CGAACTTCGC GACGATCTCG ACGACCTCGT CGTCGAACGC CTCCGCGAGT AG
|
Protein sequence | MSTQVHANLT AEQVTQISEE LDEPEWLLET RLDAYEALDS LDMPDVIRTP GRDWTNLDAL DYETLVDPLE WEQEKDRVDA ESVDVLSWAD ALEQHGELIE AQFGSIVDPQ RDYLTALSTA LFSAGTVVYV PEGVDAEDVK IRTTMNSRSL FNYTLVVAEE SSSVTILERQ TTGTNVDGEQ YYSGVVEVAA EENSSVQYGT LQNLDDDSYN FQVKRGHADT YATVDWIEGN IGSRLTKSNV ETRLLGDASE SQIVGAFFGH EDQHFDIASR VWHEAEHTTA DLVTRGVLDD AARSVYEGVQ DVGREAWDTN SYQRENTLML SDESEADASP KLIINNHDTE ASHSATVGQV DEEDMFYMTS RSVDPESAEN MLVEGFFVPV FEEIAVDELR DDLDDLVVER LRE
|
| |