Gene Hmuk_2920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2920 
Symbol 
ID8412472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2803496 
End bp2804707 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content64% 
IMG OID645021266 
ProductSufBD protein 
Protein accessionYP_003178732 
Protein GI257388959 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01981] FeS assembly protein SufD, group 1 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.689124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC AGGTACACGC AAATCTCACG GCAGAACAGG TAACGCAGAT CTCCGAGGAG 
CTCGACGAGC CCGAGTGGCT GCTCGAAACA CGTCTCGACG CGTACGAGGC CCTCGACTCG
CTGGACATGC CGGACGTGAT CCGGACGCCG GGTCGAGACT GGACGAACCT CGACGCGCTC
GACTACGAGA CGCTCGTCGA TCCCTTGGAG TGGGAACAGG AGAAAGACCG CGTCGACGCC
GAGAGTGTCG ACGTGCTCTC GTGGGCCGAC GCGCTCGAAC AGCACGGAGA GCTGATCGAA
GCGCAGTTCG GCTCGATCGT CGACCCACAG CGGGACTACC TCACGGCACT CTCGACGGCG
CTGTTTAGCG CCGGGACGGT CGTCTACGTC CCCGAGGGCG TCGACGCCGA AGACGTGAAG
ATCCGGACGA CGATGAACAG CCGATCGCTG TTCAACTACA CGCTGGTCGT CGCCGAGGAG
TCCTCGTCCG TGACGATCCT CGAACGCCAG ACCACCGGCA CCAACGTCGA CGGCGAGCAG
TACTACTCCG GCGTCGTCGA AGTCGCCGCC GAGGAAAACA GCAGCGTCCA GTACGGCACG
CTCCAGAACC TCGACGACGA CAGCTACAAC TTCCAGGTCA AGCGTGGCCA CGCCGACACC
TACGCCACGG TCGACTGGAT CGAGGGCAAC ATCGGCTCTC GACTGACCAA GTCCAACGTC
GAGACGCGCC TGCTTGGCGA CGCCTCGGAG TCCCAGATCG TCGGGGCCTT CTTCGGCCAC
GAGGACCAGC ACTTCGACAT CGCGTCCCGA GTCTGGCACG AGGCCGAACA CACCACGGCC
GACCTCGTCA CCCGCGGCGT CCTCGACGAC GCCGCCCGCT CGGTGTACGA GGGCGTCCAG
GACGTTGGCC GCGAGGCGTG GGACACCAAC TCCTACCAGC GGGAGAACAC CCTGATGCTC
TCAGACGAGA GCGAGGCCGA CGCGTCGCCG AAGCTGATCA TCAACAACCA CGACACAGAA
GCCAGCCACT CGGCGACCGT CGGACAGGTC GACGAGGAGG ACATGTTCTA CATGACCTCT
CGGAGTGTCG ATCCCGAGAG CGCGGAGAAC ATGCTGGTGG AAGGCTTCTT CGTGCCCGTC
TTCGAGGAGA TCGCGGTCGA CGAACTTCGC GACGATCTCG ACGACCTCGT CGTCGAACGC
CTCCGCGAGT AG
 
Protein sequence
MSTQVHANLT AEQVTQISEE LDEPEWLLET RLDAYEALDS LDMPDVIRTP GRDWTNLDAL 
DYETLVDPLE WEQEKDRVDA ESVDVLSWAD ALEQHGELIE AQFGSIVDPQ RDYLTALSTA
LFSAGTVVYV PEGVDAEDVK IRTTMNSRSL FNYTLVVAEE SSSVTILERQ TTGTNVDGEQ
YYSGVVEVAA EENSSVQYGT LQNLDDDSYN FQVKRGHADT YATVDWIEGN IGSRLTKSNV
ETRLLGDASE SQIVGAFFGH EDQHFDIASR VWHEAEHTTA DLVTRGVLDD AARSVYEGVQ
DVGREAWDTN SYQRENTLML SDESEADASP KLIINNHDTE ASHSATVGQV DEEDMFYMTS
RSVDPESAEN MLVEGFFVPV FEEIAVDELR DDLDDLVVER LRE