Gene Hmuk_2916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2916 
Symbol 
ID8412468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2797677 
End bp2799752 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content66% 
IMG OID645021262 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_003178728 
Protein GI257388955 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGTT CGGCAGCCCG TGTCGACAGG TCGACGCTGA CCGGCCTCCT GTCCGCGAAG 
ACTCCCGACG ACGTGTACGA CCGAGTGGTC GACGCCTGTC TCGACCGGCT CGATGCAGAT
CGCTGTGTAA TCTCGCTGGA CACCGGTGAC GGCCTGGAGC CGGTCGCAGT CAGCGACGAC
GGGGCCACTG TCGAGGATCT CCGAGGCCAG CCCGGCTGGG ACTACCAGTC ACTCGCCGTC
CGAGACGAGG ACTCCTATCT CGTCGGCGAC CTCGCCGACG ACGGGTCGAC CACGAGAAGA
TCGATCGGGG GCGACGGGGA GAGCCCCAGA GACGCCACGC GATCAGTGCT CAGCGTCCCG
ATCGACGGCG TCGGCGTCGT CTTCGCGACC GCCACCGATC CGATGGCGTT CACCGAGTCG
GATCGGGAGT GGCTCGAAGC GGTCGCCCTG TACGTCGGGT CTTCGCTGAC GCGGTTTCAC
TCCCCGGAGC CGGTCTACTC GGTCGTCACG AGTAGTGGAT CTACGACTCG CTGTGAGCAG
ACCGAAACGG ACGGCGAAGC ACCCGTCGCC CTGGAGGATC TCGACGAGCG TCTCTCGTTC
GTGCTGGACG CGACCGATTC GGTGCTCTGG ACGGTGAACG TCTCCGCTCG GACGCTCCGG
CTGTTCGGAC CGGTCGAACG GATCGTCGGT CTCGATCGAG ACACCGAATA TCCACTCTCG
GAGTTCGTCG ACGGGTTCGT CCATCCCGAC GACAGAGAGC GCCTCGTCGA GCAGTTACAG
GACGTCGCAG TCGGGCAACG AGACAGCGTC GAACTCGAGT ACCGCCTGGA GCCGGCCGAC
AGCGACGAGA GCAGGTGGTT CAGAAACCGC TCCGGGCTGC TGGAAGACGA GAGAACGACG
CTCATCGGTC TGTCGACGGA CGTGAGCGAG CACGTCTCGC GAGAGCGACG GATCAAACGG
CTTCAACAGC GGACGACGCG GTTGATCGGT GCACAGTCCC AGTCCCAGAT CGCAAACGTC
GCAGTGAACG CGGCCGAGGA AGCGCTCACG CTGCCACTCG CCGGCATTCA CCTCCGGGAC
GGCGACGTGC TCGAACCGAC GGCGGTCAAC GAGCGCGTGT GGGAGGTGAT CGGCGAAGTG
CCGAGCTATC GGGCACACGA CGACGATCCC ATCGATACGT TCGTCTGGGA GACGTACGGC
CGCGGCCGGC CGGCCGTCGT CGAGGACACG GCCGAGCACG ATCAGTTGAG CGAGGCGACG
AACGTCCGAA GCGTGATCAT CTATCCGCTG GACGACTACG GCGTCTTCGT CGCGTCCGCA
CGCGAGCCGG ATGCCTTCGA CTCCGTCGAC GTCGCACTGG GGGAGGTGCT CTCGATGGGG
ATCGTCGCGG CACTGGAGCG GACCGAACAG GAAGACCGCC TCAGAGAACA GGCCCGAGAG
CTCGAACGGA AGAACGAGCG CCTCGAAGAG TTCACCAGCA TCGTGAGCCA CGACCTCCGC
AACCCGCTCA ACGTCGCGCT CGGACGCGTC GAGTACGTCC GGAACGACCG GGACGACGAT
CACCTCGCGA CGGCCCAGCA GGCCCTCGAA CGGATGGCCT CGATCATCGA GGAGACGCTG
GCACTCGCCC GGCAGGGCCA CTCGGTGAGC GACCGCGAAC CGGTCTCGGT ACCGGAGATC
GCTCGCCGGT GCTGGCAGAC GGTACAGACG GCGTCGGCGA CGCTGGAGAC GGCGTTCGAG
GGAGCGTTCA CCGTGCTGGC CGACAGAGAA CGGCTCGCAC ACGTCCTGGA GAACCTGATC
ACGAACGCCG TCGAACACGG GGGCGAGAAC GTCACCGTTC GGATCGGGCC ACTCACGGAC
GAACCCGGAT TCTACGTCGA AGACGACGGT CCGGGGATCC CCGAGACCGA ACGGTCCGAC
GTGTTCGAGA CGGGGTACAC GACCGCACAG GACGGGACGG GATTCGGGCT CTCGCTGGTA
CGAGACATCG TCACGGCACA CGGGTGGACG ATCACCGCGA CGACCGGGTC GAACGGCGGC
GCACGGTTCG AGATCACCGA CGTCGAACGG TCGTGA
 
Protein sequence
MSGSAARVDR STLTGLLSAK TPDDVYDRVV DACLDRLDAD RCVISLDTGD GLEPVAVSDD 
GATVEDLRGQ PGWDYQSLAV RDEDSYLVGD LADDGSTTRR SIGGDGESPR DATRSVLSVP
IDGVGVVFAT ATDPMAFTES DREWLEAVAL YVGSSLTRFH SPEPVYSVVT SSGSTTRCEQ
TETDGEAPVA LEDLDERLSF VLDATDSVLW TVNVSARTLR LFGPVERIVG LDRDTEYPLS
EFVDGFVHPD DRERLVEQLQ DVAVGQRDSV ELEYRLEPAD SDESRWFRNR SGLLEDERTT
LIGLSTDVSE HVSRERRIKR LQQRTTRLIG AQSQSQIANV AVNAAEEALT LPLAGIHLRD
GDVLEPTAVN ERVWEVIGEV PSYRAHDDDP IDTFVWETYG RGRPAVVEDT AEHDQLSEAT
NVRSVIIYPL DDYGVFVASA REPDAFDSVD VALGEVLSMG IVAALERTEQ EDRLREQARE
LERKNERLEE FTSIVSHDLR NPLNVALGRV EYVRNDRDDD HLATAQQALE RMASIIEETL
ALARQGHSVS DREPVSVPEI ARRCWQTVQT ASATLETAFE GAFTVLADRE RLAHVLENLI
TNAVEHGGEN VTVRIGPLTD EPGFYVEDDG PGIPETERSD VFETGYTTAQ DGTGFGLSLV
RDIVTAHGWT ITATTGSNGG ARFEITDVER S