Gene Hmuk_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2887 
Symbol 
ID8412439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2768378 
End bp2768767 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content70% 
IMG OID645021233 
Productmethylmalonyl-CoA epimerase 
Protein accessionYP_003178699 
Protein GI257388926 
COG category 
COG ID 
TIGRFAM ID[TIGR03081] methylmalonyl-CoA epimerase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.228803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTTCG ACCACGCCGG CATCGCGACC GACGACGCGG CCACGCTCGC GGCGCTGTAT 
CGTGACCTTC TGGACGCACC GATCGCTCAC GAAGAGCGCT TCGACGGCCT CGATGTCGTC
TTTCTCGAAC TCGACGGCGG CTACTTCGAG TTGCTGGAGC CGACGGCCGA CGCCGACGGC
GCGATCGCCG GCTATCTCGC GGACCACGGC CCCGGCATCC ACCACCTCGC CGTGGCGACC
GACGACATCG AGGACGCACT GGCGGCCGCA CGCTCTGCCG GCGTGGACCT GATCGACGAG
GAGCCCCGAC CCGGAGCGTG GGGCCACGAC GTGGCGTTCC TCCACCCGCG CTCGACCGGC
GGCGTGTTGC TGGAGTTCGT CGAGCACTGA
 
Protein sequence
MHFDHAGIAT DDAATLAALY RDLLDAPIAH EERFDGLDVV FLELDGGYFE LLEPTADADG 
AIAGYLADHG PGIHHLAVAT DDIEDALAAA RSAGVDLIDE EPRPGAWGHD VAFLHPRSTG
GVLLEFVEH