| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2875 |
|---|
| Symbol | |
|---|
| ID | 8412427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2760363 |
|---|
| End bp | 2761025 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645021221 |
|---|
| Product | ribonuclease H |
|---|
| Protein accession | YP_003178687 |
|---|
| Protein GI | 257388914 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0328] Ribonuclease HI |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.542501 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCGG CCCGTGATCT CCCGTCGGAG TCACTGTCAC CGCTCGCCGA GCGCGTCGAG
CGCGTCCTGG CCGCGTACGA CTACGAGGTG TCGGCAGCGA TCGACGCGAT CGACGCGGCG
GTCCCCGGCG TCGGCGGACT GTTCGAACCC GGAACCGAGC CGGCGGAGCT GCGAGCGGCG
ATCGAACGCG TGCTGTCGGC CGACGACCAC GAGACACGGG TCGATCGCGA CCTGGCCGGC
GAGACGGCGA TTCTCTACGT CGACGGCAGC TCTCGCGGGA ACCCGGGGCC GGCGGGCGCT
GGTGCCGTCG TGCAGGACGA GGCCGGCGAG TCGCTGCTCC GTCTCGCGCG ACCGGTCGGC
TCGCGGACGG ACAACAACAC CGCCGAGTAC GCCGCGCTCG CGCTCGGGCT GGCGCGCCTG
CTGGCGCAGT TCGAGCCCGC ACGGATCGAG GTCAGGATCG ACTCGCGGAC GGTCATCCGG
AGCGTCTGGG AGGAGCGGGC CGATCCCGGT GCCCAGTTCC GCGAGTACCG AGCGGCCGTC
GTCGCGCTAC TCGAACGGGC ACCGGACGAC GACTGGCGAC ACCTCGCGGA CAGCGATCCG
AACCCCGCCG ACGCGCTGGC GACGGTCGGG GCCGACATCG CCGCGCTGGG TCCCGGTGGC
TGA
|
|---|
| Protein sequence | MTAARDLPSE SLSPLAERVE RVLAAYDYEV SAAIDAIDAA VPGVGGLFEP GTEPAELRAA
IERVLSADDH ETRVDRDLAG ETAILYVDGS SRGNPGPAGA GAVVQDEAGE SLLRLARPVG
SRTDNNTAEY AALALGLARL LAQFEPARIE VRIDSRTVIR SVWEERADPG AQFREYRAAV
VALLERAPDD DWRHLADSDP NPADALATVG ADIAALGPGG
|
|---|
| |