Gene Hmuk_2874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2874 
Symbol 
ID8412426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2757922 
End bp2760306 
Gene Length2385 bp 
Protein Length794 aa 
Translation table11 
GC content71% 
IMG OID645021220 
Producthypothetical protein 
Protein accessionYP_003178686 
Protein GI257388913 
COG category[S] Function unknown 
COG ID[COG5427] Uncharacterized membrane protein 
TIGRFAM ID[TIGR03662] Chlor_Arch_YYY domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.816639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.782461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACG GTCTCGTCGC GCTCTGGCTG GCGCTCTATC TCGCCCTACT GGTGGCCGGC 
AGCGTCGTCA CGAGCTGGCT GTTCCCGCGC TTCGAGGACG GGGGCTCCGG CGTCGCGGTC
GTGCTGTCGG TCACCGTCGT CTGGTTGGTC ACCTTCTTCG TCGGTCGACT GTCGATGACG
GCGGGGATCT GGCTGGGCGT CGCCGTCCTC GTCGGGCTGG TCGTTCTGGC GGGGAGTCGT
GGCGTCGACC TCGATCTGGG GCGGATCGGC GAGAGCTGTC TGGTCTTTAG CGCGGCTTTC
CTGTTCCTGG TCGGGATGCG CGTGTTCGCG GTCCCGCTGG GCGCGAGCGA CCCGGTGATC
GCGCCGCTCC CGCTGGCGAT CGGCGAGAAG ATGCTGGATT TCGGCCTGCT GAAGTCGCTC
GTCCGAACCG AAGCCCTGCC GCCCGAGGAC GTGTGGTTCG CCGGTGAGCC GGTCGCGTAC
TACTACGGCG GCCACCTCGT CGCGGCGATT CTCACCCGCA TCACCGGTAC CGCGGGGCGG
TTCGCCTACA ACCTCTCGCT GGCGGGTTTC TACGCGATGC TCGTGACCGC GGTGTACGGC
GTCGCCGGCA ACGTCGCGGC CGACCGCTCG ATCCCGCGTC GGCTGGCCGG CGTCCTGAGC
GTCTTCGCGG TCGGGCTCGC GAGCAACCTC ACGACGCCGG TGCGAGCGGT GCTCGCACTC
CTGCCCGACG GCCCGTCCGC GTGGCTCGCT GGCGTCGTCG GGATCGAACG GGACGGGCTT
GCAGACGGGC TCGGCCAGTT CTACTACTTC GACGCGAGCC GCGTCATCAC CGACCACCGG
AGCGACTTCG CGTTCCAGTT CGGCGACGCC GACCCGGGTG CGACCGCGCC GACGATCAAC
GAGTTCCCCT TCTTCTCGTG GTTCAACGGC GACATGCACG CCCACATGAT GAGTACCGCG
TTTCTCGTCT TCGCCGCGGC GGTCTGTCTG GCCTACTACC GGACGCCCGC CCGCGAGGTG
ACGCGCCGTC GGCTGCTCGT GGTCGGCGTC CTCCCGCCAG TCGCAGGCCT CCTGGCGGTC
ACGAACACCT GGTCGTTCCC GACGCCGGCA GGGCTGGCGC TGCTGACAGT CGCCCTCGCA
CCGGCCGACG CACGGTCACT GCTGCCCGAA CCACTCGCCG ACCGGTTCCC CGAAACTGCC
CTCTGGCGGG AGGGATCGCG CCTCGCCGTC GGCCTGGGCG TCGCCGTCGC CGTCGTCGCG
CTGGGTTTGC TCTGGTCGCT GCCGTTCTGG CTCGGGCCGG CGAGCGGGCG CGAGATCGCC
GTCCTGCCGG ACCGATCCTC GCTCACCGAA CTGCTGCTCG TCCACGGGCT CTTTCTGGCC
TCCTTCCTCG CGTACCTCGC GGCTCGCGGC CGGCAGCGAT TCGGCGAGCG AGCGACCACC
GCGACGATCG GCTCCGCCGT CGCGATCGCC GGCTTCGCGG TCCTCGACCT CGCCGCCCTC
GGCCTGTTCG TCCCGCTTGT GGGCGCGTGC TGGGCCCTCG CGCGACGGCC CGGCACGACG
CCGAGCGCCG CCGAACCCGC TGGCGACACG GACCGCGCAC GCTCGGACGG CGGCGCGGCG
AGCGCCGGCT TCGAGACGGT GCTGATCGTC GCCGGCATCG GGCTCGTGAC GCTGATCGAG
TTCGTCTACC TCAAGGAGCC GACCGGTCGG ATGAACACCG TCTTCAAGGT ATCGATGCAG
GTGTGGGTGC TGTGGAGTCT GGCCCTCGGG CCGGCGCTGG CGTGGGTGTT CACGAACCGC
GCCACCGTCC CAGAGGACAC ACTCGGTCGG GTCCGATCTG CGCTGCCCCG CGTCGCCCTC
GCCGTCCTCG TCGTCGGTGC CGGGCTGTAC GCGCCGCTGG CGGCGACGAC CGCGTTCGAC
GGCTCGGACC CGACGCTGGA CGGGCTCGCC TACCTCGACT CGGAGTATCC CGAGGAGGCC
GCCGCGATCC ACTGGCTCGA CGATCGATCC GGGCGACCGG TCCTCGTCAC GGCGGCACCG
GGCGGGTACA CCTGGGACGC CTCGGACGGC GAGGGGTCGA GTGCGCCGGC CAGTCTGACC
GGACGCCCGA CCGTCCTCGG GTGGTTCCAC GAGGCACAGT ACCGCGGGGA CGAGCCGTAT
CGGGAGCGAC TGAGAGACGT GCGGACGATC TACACCGGCG AGCCCGAAGA GCAGGCCGCG
CTGCTCGAAC GCTACGACGT GCGGTACGTC TACGTCGGCC CGGTCGAGCG GGCCACCTAC
GATCAGATCA CCGTCGACGC GGTGGCGGGC GTCGAGCCGG TCGAGGAGTT CGACGGTGTG
ACGATCTACC GGGTCACCGA CGACAGTGAG GGAGGGTCGT CATAG
 
Protein sequence
MEYGLVALWL ALYLALLVAG SVVTSWLFPR FEDGGSGVAV VLSVTVVWLV TFFVGRLSMT 
AGIWLGVAVL VGLVVLAGSR GVDLDLGRIG ESCLVFSAAF LFLVGMRVFA VPLGASDPVI
APLPLAIGEK MLDFGLLKSL VRTEALPPED VWFAGEPVAY YYGGHLVAAI LTRITGTAGR
FAYNLSLAGF YAMLVTAVYG VAGNVAADRS IPRRLAGVLS VFAVGLASNL TTPVRAVLAL
LPDGPSAWLA GVVGIERDGL ADGLGQFYYF DASRVITDHR SDFAFQFGDA DPGATAPTIN
EFPFFSWFNG DMHAHMMSTA FLVFAAAVCL AYYRTPAREV TRRRLLVVGV LPPVAGLLAV
TNTWSFPTPA GLALLTVALA PADARSLLPE PLADRFPETA LWREGSRLAV GLGVAVAVVA
LGLLWSLPFW LGPASGREIA VLPDRSSLTE LLLVHGLFLA SFLAYLAARG RQRFGERATT
ATIGSAVAIA GFAVLDLAAL GLFVPLVGAC WALARRPGTT PSAAEPAGDT DRARSDGGAA
SAGFETVLIV AGIGLVTLIE FVYLKEPTGR MNTVFKVSMQ VWVLWSLALG PALAWVFTNR
ATVPEDTLGR VRSALPRVAL AVLVVGAGLY APLAATTAFD GSDPTLDGLA YLDSEYPEEA
AAIHWLDDRS GRPVLVTAAP GGYTWDASDG EGSSAPASLT GRPTVLGWFH EAQYRGDEPY
RERLRDVRTI YTGEPEEQAA LLERYDVRYV YVGPVERATY DQITVDAVAG VEPVEEFDGV
TIYRVTDDSE GGSS