| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2868 |
|---|
| Symbol | |
|---|
| ID | 8412419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2751715 |
|---|
| End bp | 2752173 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 645021213 |
|---|
| Product | Protein of unknown function DUF1628 |
|---|
| Protein accession | YP_003178680 |
|---|
| Protein GI | 257388907 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3430] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | [TIGR02537] archaeal flagellin N-terminal-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.24462 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGA AACGATTATT CGACGACGAC GACGCAGTGT CGCCAGTCAT CGGGGTCATC
CTGATGGTGG CTATCACTGT AATCCTCGCG GCCGTGATCG CATCGTTCGT TCTCGGGCTC
GGCGATCAGA CGAGCCAAGC ACCACAGGCG AGCTTTGGAT TTGAATATGA CTCGGACAAA
GGTGAAGTGA CAGTAACTCA CCAGGGAGGA GACCAGATCG AGGCCCAAAA CATTGTTTTC
CGTGGTGATG TTGATAGTGC CAGTTCGTCC ACTGCTGTTG AGAGCGAAGG TGATAGCTGG
AATGATGGGG CAGATGCAGG GTCCACGTCG CTGATTAAAG CTGGGATGTC AACAATAGTC
GGTGTTAACG GCGATGCTTA CGAAATTTCG CTCGTCTACG AGGAACCCGG TAGCGATACG
TCGACTACGC TGACGACCGA TAGCGGTCCA ACCGCATAA
|
|---|
| Protein sequence | MDLKRLFDDD DAVSPVIGVI LMVAITVILA AVIASFVLGL GDQTSQAPQA SFGFEYDSDK
GEVTVTHQGG DQIEAQNIVF RGDVDSASSS TAVESEGDSW NDGADAGSTS LIKAGMSTIV
GVNGDAYEIS LVYEEPGSDT STTLTTDSGP TA
|
|---|
| |