Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2854 |
Symbol | |
ID | 8412405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 2739432 |
End bp | 2740064 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645021199 |
Product | halocyanin domain protein |
Protein accession | YP_003178666 |
Protein GI | 257388893 |
COG category | [C] Energy production and conversion |
COG ID | [COG3794] Plastocyanin |
TIGRFAM ID | [TIGR03102] halocyanin domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.811461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGACGG CCGCGGGCGC GGCGACCGCC GCCGGGGCGG CCGGAACCGT GGCGGCCCAG GAAGAGGAGG GCGGCGACGG CGGCGGTGGC GGCACACCGG ATTACGGCGG ATGGTTAGGC AGCGTGAGCA ACTTCGACGA GACGGTCGAC GCCACGGGGC AGGACTCGAC GACCGTCGAG GTCGGCACCC AGGCAAACGG CGGTGCCTTC GGGTTCGGGC CGGCGGCGGT CCACGTCGAC AACGGCGCGA CCGTCCAGTT CGAGTGGACC GGCGAAGGCG GCCGGCACAA CGTCGTCTCC GATGGCGACG GACCGCTCGA CTCTGGCGAC GCCGTCGAAA CGACCGGCGT CGAGTACGAA CACACCTTCG AAGAGGACGG TATCTACCCG TACTACTGTG TGCCCCACAA GAGCCTCAAC ATGAAAGGTG CCATCGTCGT CGGCTCCGAC TACCCCACGG CTGACTCCGG CGGTGGCGGC GGCGGCGGTG GTGGCGGTGG CAGTAGCGCA GCACCGGCCG TCCCCGAGAG CATCAAGTCC CTCGGCGTCG CCGCGTCGGT CGTGATGACC GCGACGCTGG GACTGGCCTA CGTGTTCATG AAGTACGGCG GCGACTACGA CACGCCGGAG TAG
|
Protein sequence | MRTAAGAATA AGAAGTVAAQ EEEGGDGGGG GTPDYGGWLG SVSNFDETVD ATGQDSTTVE VGTQANGGAF GFGPAAVHVD NGATVQFEWT GEGGRHNVVS DGDGPLDSGD AVETTGVEYE HTFEEDGIYP YYCVPHKSLN MKGAIVVGSD YPTADSGGGG GGGGGGGSSA APAVPESIKS LGVAASVVMT ATLGLAYVFM KYGGDYDTPE
|
| |