Gene Hmuk_2840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2840 
Symbol 
ID8412391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2721381 
End bp2722622 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content59% 
IMG OID645021185 
Producttransposase, IS605 OrfB family 
Protein accessionYP_003178652 
Protein GI257388879 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.249005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTACG CCTACAAGTA CCGTCTCAAG CCGTCCGACG CCCACCGAGA GGAGTTGGAC 
CGACACCGCA ATATTTGTAG GCAGCTGTAC AACCACACGC TCTACCGCCT CAACGAGTAC
CAAGATGAAC ACGGTGAACT GCCGTCCATG ACCACGCTTC GGTCGGAGCT CCCCGACCTC
AAAAAGTGGT GGGACGACCT CAACGACGTG TATTCGAAGG TTCTCCAAAC CGTCGTGGAA
CGCCTGTTTG ACAACCTCAA AGGCCTCTCC AAGCTCAAGA AGAACGGCTA CGGCGTTGGC
CAACTCAAGT GGAAGCCGCC ACGGGAGTTC CGCAGTTTCA CGTACAGTCA GTCTGGTTTC
AAGCTCGACA AGAAGGGCGG TCAGACTGTC CTGTCACTCT CGAAACTCGC GGACATACCG
ATTCGGCTTC ACCGCGCCAT CCCCAACGAC GCCACGCTCA AGCAGGTCAC AGTCAAGAAG
GAACCGACGG GCGAGTGGTT CGCCACGTTC GGTGTCGAAA TGGATCGTGA ACCTCCCGAG
CCACCTGAGA ATCCCGAGAA GTGCGTCGGT ATCGACGTGG GGATTTGCAA GTACGCTCAC
GACACCGACG GTACAGCAGT CGGGTCGCTC GACCTCACCG ACGAACGCGA ACGCTTGGAA
CGTGAGCAAC GGAAGCTCTC GCAAAAACAA CACGGGTCGA ACAGCTACGA GAAGCAACGG
CGGCGAGTCG CGAAGTATTA CGCCGACCTC CGACGGAAGC GCCGCGACTT CCTGCATAAG
TTGTCGAACT ACTACGCTCG GGAGTACGAC CTTGTGGCGG TCGAGGACCT GAATGTGAAG
GGGATGATGG AGTCGCCGTC GAACAGCCGC AACACCGCCT CCGCCGCGTG GCGGACGTTC
CTCTCGTTGC TCGAATACAA GTGTGAGCGC GAAGGGACGC ACTTCGTGGC GGTCAACCCG
AGAGGGACGA CCAAGAAATG CGCGTCATGT GGCGTCTCGA CGGAGAAGCC GTTGTGGGTC
CGTGAACACT CCTGTCCCGC CTGCGGGTTC GAGGCGGACA GGGACGCGAA CGCAGCGTGG
AACATTCTTT CTCGCGGCCT CGAAAACGTA GGAGTGGGAT ACTTCGAATC AACGCCTGTG
GAGACTGCGC TCCCTGTGGA TACACATATA TCTGCAAAGC GCGTCGTCGA ATCAGGAAGC
CCTACCCTCA AGGAGCGAAC GGTGTCAGCC GTGTGCGAGT AG
 
Protein sequence
MYYAYKYRLK PSDAHREELD RHRNICRQLY NHTLYRLNEY QDEHGELPSM TTLRSELPDL 
KKWWDDLNDV YSKVLQTVVE RLFDNLKGLS KLKKNGYGVG QLKWKPPREF RSFTYSQSGF
KLDKKGGQTV LSLSKLADIP IRLHRAIPND ATLKQVTVKK EPTGEWFATF GVEMDREPPE
PPENPEKCVG IDVGICKYAH DTDGTAVGSL DLTDERERLE REQRKLSQKQ HGSNSYEKQR
RRVAKYYADL RRKRRDFLHK LSNYYAREYD LVAVEDLNVK GMMESPSNSR NTASAAWRTF
LSLLEYKCER EGTHFVAVNP RGTTKKCASC GVSTEKPLWV REHSCPACGF EADRDANAAW
NILSRGLENV GVGYFESTPV ETALPVDTHI SAKRVVESGS PTLKERTVSA VCE