Gene Hmuk_2827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2827 
Symbol 
ID8412378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2707165 
End bp2708292 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content69% 
IMG OID645021172 
ProductProtein of unknown function DUF373 
Protein accessionYP_003178639 
Protein GI257388866 
COG category[S] Function unknown 
COG ID[COG2237] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.205795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGC TGGTGGTCTG TATCGACCGC GGGGGGACGT TTCCGCCAGA CACATCGCTC 
CCGGTCGCGG GCTACGACGC CGTCGAGGCA CTCGTGACCG AGGTCGGCCT CGCGGACCCG
GAAGACAGCC GCGTCAACAC GATGCTGGAA GGGCTGCGGG TGACCAACGA CCTCGAAGCC
GACGGCGACG ACGCCATCGT GACGGTGGTC GGCGACCGCG GCGACGGCGT CAGCGCCGAC
CGGAGCGTCG CCAGACAGGT CGACGAGCTG GTCGAGGTCC ACGATCCCGA CTCCGCGGTC
GTCGTCGTCG ACAGCGCGGA GGACGAGCGG CTGGTCCCGA TCATCGAGAG TCGCCTGCGC
GTCGACGCGG TCGACCGCGT GGTCGTCCGG CAGGCCCGCG ACATCGAATC GACGTACTAC
CTGCTCAAGC AGTTCCTCGC CGACGAGGAA CTGCGAAAGA CCGTCCTCGT CCCGCTGGGG
ATCGCACTGA TCGCGCTCCC CTTGCTCTTG TTGGTCACGT CGCCCACCTT CGCCGTCGGG
GCCATCGCGG CCGCCGTCGG CGCGTTCCTC ATCTACAAGG GGCTAGGGAT CGACGAGTAT
CTCTCGCGGC TCCCCGGCGA GATCCAGGCG GCGCTGTACT CCGGGCGCGT GTCGCTGGTC
ACCTACGTGG TCGCCGCCGG CCTGGCGCTG GTCGGCGTCT TCGTGGGTGC GCTGGGCGTG
CGGTCGACCG GCGACCAGAG CGCGTTCATC CACGCCATGC GCTTCGCGTT CGACGGCGTG
CCGTGGTTCA CGGCGGCGGC ACTCGCGGCC GCAACCGGCC GGCTCATCGA CGAACTCATG
CAGCGCGACT CCATCCGCTC GGCGTACGTC AATCTCCCGT TCGGGACGAT CGCCGTCGGA
CTGGTCGTCC GAGGGTTCTC CGAGTACTTC CTCGAACGGG CCGGCGCCAT CGGCCAGTTC
CAGATCGGAC CGGCGACGAT CGGCCCGGTG CTGATCGAGG CCGTCACGCT GGAGCGAGGC
CCGCGGCTCG CGGTGTTCAT TCTCGGTGGG ATCCTCGTGA GCCTGATCGG CGTCCGCTTT
GCCGCGTACT TCAGCCAGTC GAGCGTCCAG GACGAGTTCG TCGACTAG
 
Protein sequence
MTTLVVCIDR GGTFPPDTSL PVAGYDAVEA LVTEVGLADP EDSRVNTMLE GLRVTNDLEA 
DGDDAIVTVV GDRGDGVSAD RSVARQVDEL VEVHDPDSAV VVVDSAEDER LVPIIESRLR
VDAVDRVVVR QARDIESTYY LLKQFLADEE LRKTVLVPLG IALIALPLLL LVTSPTFAVG
AIAAAVGAFL IYKGLGIDEY LSRLPGEIQA ALYSGRVSLV TYVVAAGLAL VGVFVGALGV
RSTGDQSAFI HAMRFAFDGV PWFTAAALAA ATGRLIDELM QRDSIRSAYV NLPFGTIAVG
LVVRGFSEYF LERAGAIGQF QIGPATIGPV LIEAVTLERG PRLAVFILGG ILVSLIGVRF
AAYFSQSSVQ DEFVD