Gene Hmuk_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2813 
Symbol 
ID8412364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2696107 
End bp2697879 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content69% 
IMG OID645021158 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_003178625 
Protein GI257388852 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.218828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAATCCA CGATTCGGAT CCTGGCTGTC CGTGGGCAGT CGGAGGACGG TGACGACGTG 
GGGGCGGTGC TGAACCGGTC CGGTGAGGAC TTTCGGGTAG ACACCGTCGC AGGGGTCGAC
GGGATCGTCA GACAGTTCGA GTCGAACGCC GACGCCTTCG ACTGTGTCGT CGTCGACCGC
GGTCTGTCCT CGCCGCTCGT CCGTGACGCA CTCGACGCCG TCCACGAGCG GCGGCCAGCG
TTGCCGGTCG TCGTCACTAC GGACGCCGCG GCGACGGGGG TCGCCGTCGC CGCGATCGAT
GCGGGCGCGA CCGAGGTCTT CCGGTGGCCG GCGACGGACC AGGCGACGCT GCTGGCTCGA
CGGGTTCGGA CCGCCGTCTC GTCGGCGGCG ACGACCGCAC GCACTCTCAC GCCGTCCGAG
TGGACGGCGG TGTTCGAGCA CGTCGACTGT GGCGTCGCGA TCGTCGAACT CTCCGAAGAC
GACTGCCGGT ATCGCCGGTG TAACGAGCGG CTCGCGGAGC TGGCCGGTAC GTCGGTCCCA
GAGATCGAAG GCCGGACGCC CACCGAGGCG TTCGGTCCGG AGTACGGCCC CTCCATCGAG
GCCCGATACC GGGAGTCGCT GGCGTCTGAC GAGCCGGTGT CGCACACGGT CGGTCCCGAG
TCACTGGACG GACGTGTGTT CCACGAGGCA CAGATCCGGC CGATCGGAAG CGGCGGGGAC
GCCGAGAAGC TCCTCGTCGT CGTCCGAGAA GTCACGGGCG AACACGAACG CCAGGCGGAA
CTCAGACAGT CCAGGCGGCG GCTCAGGGCG CTGTTCGAAC ACTCGCCCGA CATGATCAAC
GTCCACGACG CCGAGGGACG GATCGTCGAG ACCAACGCCC AGATGCGCGA GATGACCGGC
TACGACGAGT CGACGCTGAC CGACATGTCC GTCTGGGACC TCGATCAGGC CGCCGATCCG
GAGCGCGCGC TGTCGCTCTG GGAGGAGATG GAACCCGGCG ACAGGTGTCG CTCGGAGGGC
GAGTTCCTGT GTCGAGACGG CACGACGTTC CCCACGGAAG TCCACATCCG TTGCCTGGGC
GTCGACGACG GCGAGCGGTT CCTGGCGATC AGCCGCGACG TGAGCGACCA GCGGGAACGC
GAGCGCGAAC TCCAGCGCAA GAACGACCGC CTCGAAGAGT TCGCGTCGGT GGTCTCTCAC
GACCTCCGAA ATCCCCTGCA GGTGTTGCGT GGGGCACTCG ACGGCGCGGC CGAGACCGGC
GATCGAGCGC ACTTCGAGCG CGGTCACCGC GCGATCGATC GCATGGAGGA CATGATCACC
GACATCCTCG CCCTTGCCCG CCAGGACGCC GTGGGCGAGT TCCGGACGGT CCCGCTCGCG
AGGATCGTCG AGACCGCCTG GCAGAATCTC CGGACCGCCG ACGCGACGCT CGTCGTCGAG
ACCGACCTGC GGATCCGTGC CAGCGAGCTC CGACTCAGAC AGCTCCTCGA AAACCTCCTG
CGCAACGCGG TCGAGCACGC CGGTGCGGAC ACGACGGTTC GAGTCGGGAC GCTCCCGGAC
GGCTTCTACG TGGCGGACGA CGGCCGTGGC ATTCCCGCGG CCGACCACGA CCGCGTCTTC
GACACCCAGT ACTCGACCGC GCCCAACGGG ACCGGGTTCG GGCTCGCGAT CGTCTCCGGG
ATCGCCGAGG CCCACGGCTG GCAGATCACG CTCACCGAGA GCGAGGACGG CGGCGCACGG
TTCGAGTTCT CCGGCGTCAC GATCGACGAG TGA
 
Protein sequence
MQSTIRILAV RGQSEDGDDV GAVLNRSGED FRVDTVAGVD GIVRQFESNA DAFDCVVVDR 
GLSSPLVRDA LDAVHERRPA LPVVVTTDAA ATGVAVAAID AGATEVFRWP ATDQATLLAR
RVRTAVSSAA TTARTLTPSE WTAVFEHVDC GVAIVELSED DCRYRRCNER LAELAGTSVP
EIEGRTPTEA FGPEYGPSIE ARYRESLASD EPVSHTVGPE SLDGRVFHEA QIRPIGSGGD
AEKLLVVVRE VTGEHERQAE LRQSRRRLRA LFEHSPDMIN VHDAEGRIVE TNAQMREMTG
YDESTLTDMS VWDLDQAADP ERALSLWEEM EPGDRCRSEG EFLCRDGTTF PTEVHIRCLG
VDDGERFLAI SRDVSDQRER ERELQRKNDR LEEFASVVSH DLRNPLQVLR GALDGAAETG
DRAHFERGHR AIDRMEDMIT DILALARQDA VGEFRTVPLA RIVETAWQNL RTADATLVVE
TDLRIRASEL RLRQLLENLL RNAVEHAGAD TTVRVGTLPD GFYVADDGRG IPAADHDRVF
DTQYSTAPNG TGFGLAIVSG IAEAHGWQIT LTESEDGGAR FEFSGVTIDE