Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2803 |
Symbol | |
ID | 8412354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 2688932 |
End bp | 2689690 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645021148 |
Product | ABC-2 type transporter |
Protein accession | YP_003178615 |
Protein GI | 257388842 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.363524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCCGCG TCGGTCGGAT CGGTGCGGAA CTCACGGCCG CCCGGAAGGC CTTCCTGCGG CGACGGACGG CCGTCTTCTT TACGTTCTTT TTCCCCCTGT TGATCGTCGT GATCTTCGGG GCACTGGTCC AGACCAGACC CGGCGACGGC GGGCTGTTCA CCGAGTCCCC GGCCTTCTAC GTACCGGGCT ATCTCGCGGT CGTCGTCCTC TTTACCCCGC TGTCTCGCGT CGGCAGCGAG GTCGCTCGGC ACCGCGACGG CAACCGCTTC GAGAAGCTCG CGACGACGCC GCTGACCCGC CCGGAGTGGC TGGTCGGTCA GACCCTCGTC AACGTTGGCG TCATCGGCCT CGCCAGTCTG CTCGTGCTGG GTGTGATGGT GCTGTTGACC GGCGCGTCGA TCGTGGTGAC CCCGGCGACG GTCGTGCTCA CGGCGCTGTT CGTCGCGGTC GGCGTGGCGC TGTTCTGTGG CGTCGGCGCG TTGCTGGGGA GCTACGCCGA CTCACAGGAC GGCGTCATCG CGGCCTCCAA CGGGATCGCG CTCCCGCTGC TGTTCCTCTC GGAGACGTTC GTCCCGACGA GCCTGCTGCC GGGGTGGCTG CCGACGTGGC TCTCGCCGCT GACGTACTTC TCGCGGGGCG TCCGTGCGGT CGCGACGCGG GGCGACGTGG CCGGCGGCGT CGAACACCTC GCGGTGCTGA CGGTCGTCGG TGTCGTGGTC TTCTTCGCCG GTGCGCTCGC GCTCCCTCGG ACGGACTGA
|
Protein sequence | MSRVGRIGAE LTAARKAFLR RRTAVFFTFF FPLLIVVIFG ALVQTRPGDG GLFTESPAFY VPGYLAVVVL FTPLSRVGSE VARHRDGNRF EKLATTPLTR PEWLVGQTLV NVGVIGLASL LVLGVMVLLT GASIVVTPAT VVLTALFVAV GVALFCGVGA LLGSYADSQD GVIAASNGIA LPLLFLSETF VPTSLLPGWL PTWLSPLTYF SRGVRAVATR GDVAGGVEHL AVLTVVGVVV FFAGALALPR TD
|
| |