| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2798 |
|---|
| Symbol | |
|---|
| ID | 8412349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 2684609 |
|---|
| End bp | 2686027 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645021143 |
|---|
| Product | protoheme IX farnesyltransferase |
|---|
| Protein accession | YP_003178610 |
|---|
| Protein GI | 257388837 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
|---|
| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.400427 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGCC GCCGCCCACG GTTCACGACG ATGCTCGCCG CGAGTGCGGT TGGCGTCTAC
CTGCTGGTCG TCGCTGGCGC GACGACTTCG ATCGCCGACG CCGTCCACGC CTGTTCGACG
TGGCCGACGT GTGAAGGGCC GATTCTCGGA GACGTGGGAC TCGCGATCGC CTGGACCCAC
AGGCTGCTCG CGGCCGCGGT CGGTGTGCTG GTAGTCGGGG CGGCCGCCGT CGGGATCCGT
ACCGGTGCCA GACGACGGGT CCTGGGGACG CTGGCAGTCG CGCTGGTCCT CTATCCCGTC
CAGATCGCGC TCGGCGCGTT CGTCGCGCTC AACGGTGCTG GCACTCCGTT CCCGGGTGCC
CACCTCGCGA CGGGCATGGC GATCTTCGCC GCCCTCGTGG GCGCGCTGGC GTGGCAACTG
GAAGCCGAGA CGGGGACCGA CGACGAGACG CCGGTGACCG AAACGGTCGA GGTGCCCGAA
GTCGACGACG ACGAGCCCGA GGGGCCGCCG ATCGGCGCGC TCTCGACCCG CGAGCGCATC
ACCGCGACCG CGTTCGCGTA CTTCCGGCTG ACGAAGCCCC GGCTGATGTG GCTGCTCTGT
CTCGTCGCGG CGGCCGGGAT GGCACTGGCG GCCGCACACG TCGCCGGCCC CGCGAACCCG
AGCCTCGCGA CGTCGACGAT CCTGCTGACC CTCGGTGGGG GCGTGCTCGC GATCGGCGCG
TCGGGGACGT TCAATCACGT CCTCGAACGC GACATCGACA AGCGGATGGA CCGAACGTCC
GACCGACCGA TCGCGACCCA CCAGCTCCCG GTCCGGAACG CGCTGGCCTT CGGGATCGCA
CTGGCCGTGG CCTCCCTCGC GCTGTTCTGG CAGGTCAACG CGATCGTGGC CGCGCTCGGA
CTGGCGGCGA TCCTGTTTTA CAGCGTCGTC TACACGCTCG TCCTCAAGCC CAACACCGTC
CAGAACACCG TCATCGGCGG GTTCGCGGGA TCGCTGCCAG CGCTGATCGG CTGGGTCGCC
GTCACCGGGA GCTTCGACCT GCCCGGGCTC GCACTGGCGG GCATCATCTT CCTGTGGACG
CCCGCTCACT TCTACAACCT CGCGCTGGCG TACAAGGAAG ACTACGCCAG GGGCGGCTTC
CCGATGATGC CGGTCGTCCG CGGCGAGACT GAGACGCGAA AGCACATCGT CTACTACCTC
GGCGCGACGC TGGTCGCGGC CGGCGTCATG GTCTCGATCA CGTCACTCGG TGCGCTGTAC
ACCGTGACGA CGGCGCTGCT CGGTGCCGTC TTCCTGTGGG CGGTCGTTCG GCTCCACCGC
GAACGGACCG AGCAGGCGGC CTTCCGAGCG TTCCACGCCT CGAACGCCTA CCTCGGGGCG
CTGCTGATCG CGATCGTCGT GGACGCACTC GCAGTATGA
|
|---|
| Protein sequence | MNGRRPRFTT MLAASAVGVY LLVVAGATTS IADAVHACST WPTCEGPILG DVGLAIAWTH
RLLAAAVGVL VVGAAAVGIR TGARRRVLGT LAVALVLYPV QIALGAFVAL NGAGTPFPGA
HLATGMAIFA ALVGALAWQL EAETGTDDET PVTETVEVPE VDDDEPEGPP IGALSTRERI
TATAFAYFRL TKPRLMWLLC LVAAAGMALA AAHVAGPANP SLATSTILLT LGGGVLAIGA
SGTFNHVLER DIDKRMDRTS DRPIATHQLP VRNALAFGIA LAVASLALFW QVNAIVAALG
LAAILFYSVV YTLVLKPNTV QNTVIGGFAG SLPALIGWVA VTGSFDLPGL ALAGIIFLWT
PAHFYNLALA YKEDYARGGF PMMPVVRGET ETRKHIVYYL GATLVAAGVM VSITSLGALY
TVTTALLGAV FLWAVVRLHR ERTEQAAFRA FHASNAYLGA LLIAIVVDAL AV
|
|---|
| |