| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2748 |
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| Symbol | |
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| ID | 8412299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | - |
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| Start bp | 2636664 |
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| End bp | 2638235 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645021093 |
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| Product | TraB family protein |
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| Protein accession | YP_003178560 |
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| Protein GI | 257388787 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC GCGCCGAGAC CACGCGCAAT CTGCCACAGG GGGGTGGTGG CGAGGGGCGT
GTGACGGTAG TAGGGACGGC ACACGTCTCA CAGGATAGTG TCGAGGAAGT CGAACGGACG
ATCGAGGACG AACAGCCCGA CGTGGTCGCC GTCGAGCTGG ACGAGGGTCG CTACAGGCAG
ATGAAAGGCG AGACGCCGGA GGATCTCGAC GCCAGTGATC TGCTTCGGGG GAACACGGTC
TTTCAGTTTC TGGCCTACTG GATGCTGTCG TACGTCCAGA CGCGACTGGG CGACCGCTTC
GACGTGAGTC CCGGTGCAGA CATGATGGCC GCAGTCGAGA CGGCCGAACG CAACGGTCTG
GGGGTCGCAC TCGTCGACCG CGACATCCAG ATGACGGTCC AGCGGTTCTG GGCGCGCCTC
TCTTTCTGGG AGAAGCTCTC ACTGGTCGGC GCTCTGTTCG CCGGCATGGG GGAGTCCCGA
ACCGTCGGGC TCTCGATCGG CCTCACGATC GGGGTGTTAG TGAGCGTCGT CGTCGAGTCG
ACGATCGGTC CGCTCGTGGT TCCGGCCGGG AACTGGCTCG GCGGTTCGCT CCCACTCGTC
GGTGCGCTGG GAGGCCTGGG CGTCGCCGTC GCAGACGGAC TCGTCGTCGC GCTCGCCGTC
GCACTGGTGG TCGGGATCCC GGTCCTCGCA CTGTTGACCC GTGCCAGCGG CGGCGAAGAG
TACGAGGAGT TCGACCCCGC CGAACTCACC GACGTGGACG TCGTGACGGC GATGATGGAG
GAGTTTCGCC AGTTCTCGCC GGGCGGTGCG GAGGCCCTGA TCGACGAGCG CGACGCCTAC
ATCGCACACA ACCTCGTGGA CCTCCGTGAC GCCGGCTACC ACGTCGTCGC TATCGTCGGT
GCCGGCCACC GCGCGGGGAT CGAACGCTAC CTCGATCACC CCGAGGAACT GCCGCCGGAG
TCCTCGCTGG TCGGTCGGGA GACCGGCGGC TGGTTCTCGC CGTACAAGCT CTTTGGTTAC
CTCTTTACGC TTGGCTTCCT GGTCTTTTTC CTCCTGCTGG CGATGGCAGT CTACACCGGC
GTGCCGGGGG CCTCCAGCGA GTTCCTGTTC ACGCTGTTCG GGACTTGGTT CCTCGTCAAC
GGGATCGTCG CCGCGGCCCT GGCCCGACTC GCCGGAGCTC ACTGGTCGAG CTCCGCCGTC
GGCGGCGCGG TCGCGTGGCT CACGAGCGTC AATCCGCTGC TCGCGCCCGG GTGGTTCGCG
GGCTACATCG AGTTGCGATA CGTCAACGTC AACGTCGGCG ACATCAGCAC GCTCAACGAG
ATCCTCGACG ACGAACAGGC CCCGCTGTCC GACATCTTCC AGCGACTCCG GGCGGTGCCC
CTGTTCAGAC TCATCCTCAT CGTTGCGATG ACCAACGTCG GGAGCATGAT CGCGAGCGCG
CTGTTCGCGA CGACGCTGCT GCCGATCATC GCGGCCGGCG CACCGAACGT CAACGGCGTC
GACGGCGTCG TTCGACTCAT GATCCAGGGC GCACGGAACA GCGCCGACCT GCTGTGGGGG
CTGGTGCGAT GA
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| Protein sequence | MTDRAETTRN LPQGGGGEGR VTVVGTAHVS QDSVEEVERT IEDEQPDVVA VELDEGRYRQ
MKGETPEDLD ASDLLRGNTV FQFLAYWMLS YVQTRLGDRF DVSPGADMMA AVETAERNGL
GVALVDRDIQ MTVQRFWARL SFWEKLSLVG ALFAGMGESR TVGLSIGLTI GVLVSVVVES
TIGPLVVPAG NWLGGSLPLV GALGGLGVAV ADGLVVALAV ALVVGIPVLA LLTRASGGEE
YEEFDPAELT DVDVVTAMME EFRQFSPGGA EALIDERDAY IAHNLVDLRD AGYHVVAIVG
AGHRAGIERY LDHPEELPPE SSLVGRETGG WFSPYKLFGY LFTLGFLVFF LLLAMAVYTG
VPGASSEFLF TLFGTWFLVN GIVAAALARL AGAHWSSSAV GGAVAWLTSV NPLLAPGWFA
GYIELRYVNV NVGDISTLNE ILDDEQAPLS DIFQRLRAVP LFRLILIVAM TNVGSMIASA
LFATTLLPII AAGAPNVNGV DGVVRLMIQG ARNSADLLWG LVR
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