| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2722 |
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| Symbol | |
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| ID | 8412273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | + |
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| Start bp | 2607710 |
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| End bp | 2610133 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645021068 |
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| Product | type II secretion system protein |
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| Protein accession | YP_003178535 |
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| Protein GI | 257388762 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.722587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCA ATCCACTGGG GACGCTCCCC GTCTTCGCGG TCATCGCGAT CCTGTGCGTG
GTCGCGCTCG CGATGCTCGA CGAGACGTTC GACACGTCGC TGACGCGGTT CGGCCGACGG
CTGTTCGGCC GGTACATCCC GGAGTCTGAG GAGCGAGAGC GCCTCCTGAA GTCGGCGTTC
GTGGTGTACA CCTATCGGAC CTACGCCGCC CGGACGCTGC TGTACACGGC GCTGGCGGCC
CTGGGCGGTG CGATCACTGG CGTCTACCTG TTCGGCGGAC TGTTGCTGGC GATTCCGGGC
ATCGTCGATC TCATGATGGG GTTGCCCCGG ACGATGGTCA ACGCGCTGGG GATCCGCGGG
TTCGAACTCG TGTTGACCCC GCGGGAGATC CTGTGGATCC TGATCGGCGG GGGCGTGATT
ACCGGCGTGA CGGCCGCGGG GCTGACCTAC TGGCTGCGCT GGGAGATGCC CCGAAGCAGA
GCCGCGGTCC GCCAGCGAGC GATCGACGAG GGACAGGGGC GGACCCTCGC GTTCCTCTAT
GCGCTCTCGC GGGGCGGCGT CTCGTTTCCC GCGGCGTTGC GGACGCTCTC GGACAACCGC
GAGATCTACG GGGCCAGCGC GGAGGAGGTC TCGGTCGCGG TCAGGCAGAT GGACCTGTTC
GGCCAGGACA TGATCACCGC CGTCAGAGGG ATGGCCGGTC GGACGCCAAG CGAGGACTTC
CAGACGTTCG CCGAGAACCT CGCGAGCGTG CTTCAGAGCG GGCGCAGCCT CTCGACGTTC
CTCAGAGAGC AGTACGAGCG GACGAAAGAC GAGAGCGAGC GCCGCCAGGA AGAGATCCTC
GAACACCTCG CGACGGTCGC GGAGGCGTAC GTGACGGTGC TGGTCGCCGC CGTGCTCTTT
TTCATCACGA TCTTGCTCGT GTTCGGCCTG ACCCTGGCCG ACACGCTCGT GTTCATCCAG
ATGGTCGGCT ACCTGATGAT CCCGCTGGCC AACGCCGGGT TCGTGCTGTA CCTCGGCCAG
CGGCTGGCGA TCCTCGGCAT CGGAAACAAC AAGACGACCA CGTTACTCGA TCGACGAGCG
ACGACGACGT TCGCCAAGCC GACCGACTCG GGCGGGTCGA CGGCGACTGA CGGCGGCTAC
GCCGACTCCA TCGAGCGACG CCAGCTGGCC GTCTACGACC GGATCGCGAC GGTCAAGCGC
CTCGTCACCT CGCCGGTCCA GACGTTCCTC TGGAACCCGT CTCGGGTGCT CTACGTCACG
GTGCCGATCG CCGTCCTCGC GGTCGCGCTC CGGGCACCGG CGGCCTTCGA GACGGGGACG
GTCAACCTCC GGGTCCTCGA CGACGTCCTG ATCCAGTCGC TCCTGTTCGT GCTGGCGACG
TTCGCGATCG CCCGGGAGCT GTACACCCGT CGGATCCGCC GGATCGAGGC TTCTACGCCG
GAGTTGCTCG AACGCCTGGC CAGCCTCAAC GAGGCCGGCA TGACGGTCGT CGAGAGCCTG
GAGCGGGTCC GCGGGACCGA CGTTGGCGCA CTCAGCGAGG AGGTCGATCG GATCTGGGCG
GACGTGACGA TGGGTGCCAA CGTCGAGGAC GCCCTGACGA GGTTCGGCCG CCGGATCAGG
ACGACCTCGA TGTCTCGAGT GGTCACGCTG CTGATCAACG CCATGCGATC GAGCGGCAAG
ATGGGGCCGA TCCTGCGGAT CGCCGCCGAT CAGGCCCGCT CCGACTACCG GCTGCGCCGC
CAGCGCCGCC AGGAGATGCT CACCTACCTC GTCGTCATCT ACATCTCCTT TCTCGTCTTC
CTGGTCATCA TCGCGTCGGT CCAGGAGGTG CTCGTGCCGG CGTTGCCCTC CAGCGTCCCG
ACCCCCGAGA ACACGGGGCG ATTGGGCGTC AACGTCGATC AGTTCGCGCG ACTGGGCCAG
GTCGACAAGG CAGCGTACAC GCTCGTGTTC TTCCACACGG CGCTGATCCA GGCGCTGTGT
ACCGGCTTCG TCGGCGGGCA ACTCGGCGAG GGGTCGCTCA GAGACGGCGC AAAACACGCC
GCGATCATGC TGGGCGTGGC CTACGTCGTG TTCCTCTTGC TGTCCTCGCC GGTGGCCTCG
CTGACCGTCG ACAGTCCCGC CGCCGGACAG GAGCGCATCA CGGTCGATTC CGCCTCGCTG
TCCGGCGGCG GCTACGTCGT CGTCTACGAG GGCGAAGCCG GCGGCGAGGT CGTCGGCCAG
TCGGCGTATC TCGTCGCCGG CACCCACGAG GACGTGACGA TCGAACTCGA CAGCCCGGTC
GAGCGGCGGG ACTCGCTGGT CGTCGTGGCG CATCTCGACA CCGACGACGA TCGGGTGCTG
AACTACGGCG GCTTCGAGCG AGACCGGCCC TACCCCGCGC CGGGGCAAGG CGAGTTCGTC
GCCGTATCGG TCACAGTCGA GTAG
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| Protein sequence | MQLNPLGTLP VFAVIAILCV VALAMLDETF DTSLTRFGRR LFGRYIPESE ERERLLKSAF
VVYTYRTYAA RTLLYTALAA LGGAITGVYL FGGLLLAIPG IVDLMMGLPR TMVNALGIRG
FELVLTPREI LWILIGGGVI TGVTAAGLTY WLRWEMPRSR AAVRQRAIDE GQGRTLAFLY
ALSRGGVSFP AALRTLSDNR EIYGASAEEV SVAVRQMDLF GQDMITAVRG MAGRTPSEDF
QTFAENLASV LQSGRSLSTF LREQYERTKD ESERRQEEIL EHLATVAEAY VTVLVAAVLF
FITILLVFGL TLADTLVFIQ MVGYLMIPLA NAGFVLYLGQ RLAILGIGNN KTTTLLDRRA
TTTFAKPTDS GGSTATDGGY ADSIERRQLA VYDRIATVKR LVTSPVQTFL WNPSRVLYVT
VPIAVLAVAL RAPAAFETGT VNLRVLDDVL IQSLLFVLAT FAIARELYTR RIRRIEASTP
ELLERLASLN EAGMTVVESL ERVRGTDVGA LSEEVDRIWA DVTMGANVED ALTRFGRRIR
TTSMSRVVTL LINAMRSSGK MGPILRIAAD QARSDYRLRR QRRQEMLTYL VVIYISFLVF
LVIIASVQEV LVPALPSSVP TPENTGRLGV NVDQFARLGQ VDKAAYTLVF FHTALIQALC
TGFVGGQLGE GSLRDGAKHA AIMLGVAYVV FLLLSSPVAS LTVDSPAAGQ ERITVDSASL
SGGGYVVVYE GEAGGEVVGQ SAYLVAGTHE DVTIELDSPV ERRDSLVVVA HLDTDDDRVL
NYGGFERDRP YPAPGQGEFV AVSVTVE
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