Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2721 |
Symbol | |
ID | 8412272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 2606080 |
End bp | 2607708 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645021067 |
Product | type II secretion system protein E |
Protein accession | YP_003178534 |
Protein GI | 257388761 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.261716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGCG ACGAGACAGA GCACGACGGA TCGAGTTCGA CGCCGCTCTC GGGCGTGCGC GACTGGCTCT CGCGGACGGC TCGCATGCTC AGCGGCGCGG CCGTCCCGTC GACGAACTAC GATCCACAGC GCCACGGCAA GCTGGTCGAG TACACGGTGC CCGAGCAGTA CGACGAGATC GACCGCTACT GGCTCAACGC ACCCTTTGCC TTCGCCTCGA TCAACCACGA TCCCGAGGCC GACGAACAGT TCTACCAGGT CGTCGAACCC TCGCTCGACG AGTTCGAGCG CGATCTGCTC GATCGGCTCT TCGAGGACAT CCGCGGTCCG CTCATCTACC GCGAGGACGT GAGCGACGAC CCCGAGGCGG CGCTGGCCGC GGCGCTGCGG GACCGGATCG AGGAGTACGG CGTCGTCGTC GAGCCCGAGA CGTTTTACCG GCTGCTGTAC TACCTCTATC GGTCCTTCCT GGGCTACGGC CGGATCGACC CGCTGATGCA CGATCCCCAC ATCGAGGACA TCTCCTGTGA CGGGGCCGGG CTACCGATCT TCGCGTATCA CGACGCGTAC ACCGACATCG AGACCAGCGT CGTCTACGAG GAGGGCGAGC TGAACGACTT CGTGATCCAG CTCGCACAGC GGTCGGGCCG GCACGTCTCC GTCTCTGATC CCGTCGTCTC GACGACGCTG CCGGACGGCT CGCGGATCGA GCTGGCACTC GGCGAGGAGG TCACGCCCCG CGGCTCCGCG TTCACCATCC GGAAGTACGC CGACGAGCCG TTCACGCCGA TCGATCTGCT GAACTACGGG ACCTTCTCCG TCGAGATGCT GGCCTACCTC TGGCTGGCCA TCGAGTCCAA CAAGTCCCTG ATCTTCGCCG GGGGGACGGC GGCGGGCAAG ACGACCTCGA TGAACGCCGT CTCGATGTTC ATTCCGCCCC GATCGAAGGT GTTGACCATC GAGGACACCC GCGAACTGTC GCTGTACCAC GACAACTGGC TCTCGTCGGT GACCAGGGAG CGACTCGACG AGTCGGACAT CACGATGTAC GACCTGTTGC GGTCGGCGCT GCGCCACCGG CCGGAGTACA TCATCGTCGG CGAGGTCCGC GGCGAAGAGG CGATTACGCT CTTCCAGGCG ATGAACACGG GGCACACGAC GTTCTCGACG ATGCACGCCG ACTCGGTCCA GACGGTGATC AACCGGCTGG AAAACGAGCC GATCAACGTG CCGCGACCGA TGGTTCAGAG CCTCGACATC CTCTGTGTGC AGGTGCTTGG CCGCTCGGGC GGGGAACGCG TCCGGCGAGC CAAGACCCTC GCCGAGATCG AGGGGATCGA CCAGCGGACC GGGGAACTCG ACTACTCCAA CGCCTACGCC TGGCAGGCCG ACGAGGACTA CTTCGAGGAC TCAAACAGCG ATCTGCTGGA CGAGATCAGG CGCGAACGGG GCTGGAGCCA GTCGGAGTTG CTCCGGGAGA TGGACGACAG AAAGCGGTTC CTGCGATACC TCCAGGCGGA GTCGATCACG GACTACCGGC GATTTACCGC GATGGTCAAC AAGTACTACG CGGACAGCGA GACGGTGATG GAGCGGATCG ACCGGGCCGA CATCGACGCG ACACCCTGA
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Protein sequence | MAGDETEHDG SSSTPLSGVR DWLSRTARML SGAAVPSTNY DPQRHGKLVE YTVPEQYDEI DRYWLNAPFA FASINHDPEA DEQFYQVVEP SLDEFERDLL DRLFEDIRGP LIYREDVSDD PEAALAAALR DRIEEYGVVV EPETFYRLLY YLYRSFLGYG RIDPLMHDPH IEDISCDGAG LPIFAYHDAY TDIETSVVYE EGELNDFVIQ LAQRSGRHVS VSDPVVSTTL PDGSRIELAL GEEVTPRGSA FTIRKYADEP FTPIDLLNYG TFSVEMLAYL WLAIESNKSL IFAGGTAAGK TTSMNAVSMF IPPRSKVLTI EDTRELSLYH DNWLSSVTRE RLDESDITMY DLLRSALRHR PEYIIVGEVR GEEAITLFQA MNTGHTTFST MHADSVQTVI NRLENEPINV PRPMVQSLDI LCVQVLGRSG GERVRRAKTL AEIEGIDQRT GELDYSNAYA WQADEDYFED SNSDLLDEIR RERGWSQSEL LREMDDRKRF LRYLQAESIT DYRRFTAMVN KYYADSETVM ERIDRADIDA TP
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