| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2713 |
|---|
| Symbol | |
|---|
| ID | 8412264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2599984 |
|---|
| End bp | 2600853 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645021059 |
|---|
| Product | succinyl-CoA synthetase, alpha subunit |
|---|
| Protein accession | YP_003178526 |
|---|
| Protein GI | 257388753 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0734164 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGC TCGTCGACGA GGACACTCGC GTCGTCGTCC AGGGGATCAC GGGCGGCGAG
GGGAAGTTCC ACACCGAGCA GATGATGGAG TACGGCACCA ACGTCGTCGC CGGTGCCGTG
CCCGGCCGCG GCGGCCAGGA AGTCGCCGGG GTGCCGGTCT ACGACACCGT CGACCGCGCC
GCGCGCGAAG AGAACGCGAA CACCGCCGTC GTGTTCGTCC CGCCGGCCTT CGCTGGCGAC
GCGCTGTTCG AGGCACTCGA CGCACCGGTC GACCTCGTCG TCGCCATCAC CGAGGGCATT
CCGACCCAGG ACATGTCCCG CGTCAAGCGC AAACAGGACG AGACCGACAC CCACCTCGTC
GGTCCGAACT GTCCGGGCGT CATCACGCCG GGAGTCGCGA AGCTCGGCAT CCTGCCGGGC
AACATCTTCT CCTCGGGCGA CGTGGGTCTG GTCTCTCGCT CCGGGACGCT GACCTACCAG
GTCGTCGACA ACCTCACCAA CCGCGACATC GGTCAGTCGA CCGCTATCGG TATCGGCGGC
GACCCGATCA TCGGGACGAG CTTCATCGAC GCGCTGGAAC TGTTCGAGGC CGACCCCGAC
ACGAAGGCCG TCGTGATGTG TGGCGAGATC GGCGGCGAGG ACGAGGAGCA GGCCGCCCGC
TACATCGGCG AGCACATGGA CACGCCCGTC GCCGGCTTCA TCGCCGGCCG TACCGCGCCA
CCGGGCAAGC GGATGGGCCA CGCGGGCGCT ATCGTCTCCG GCAGCGGGAC CGGCACCGCC
GAGTCCAAGA TCGAGGCTCT GGAGAGCAAC GGCGTGCCCG TCGGTGACAC CCCCGAGGAA
GTCGTCGACC ACGTCGAAGA CATCCTGTAG
|
|---|
| Protein sequence | MSVLVDEDTR VVVQGITGGE GKFHTEQMME YGTNVVAGAV PGRGGQEVAG VPVYDTVDRA
AREENANTAV VFVPPAFAGD ALFEALDAPV DLVVAITEGI PTQDMSRVKR KQDETDTHLV
GPNCPGVITP GVAKLGILPG NIFSSGDVGL VSRSGTLTYQ VVDNLTNRDI GQSTAIGIGG
DPIIGTSFID ALELFEADPD TKAVVMCGEI GGEDEEQAAR YIGEHMDTPV AGFIAGRTAP
PGKRMGHAGA IVSGSGTGTA ESKIEALESN GVPVGDTPEE VVDHVEDIL
|
|---|
| |