Gene Hmuk_2685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2685 
Symbol 
ID8412236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2571464 
End bp2572342 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content69% 
IMG OID645021031 
Producthalocyanin domain protein 
Protein accessionYP_003178498 
Protein GI257388725 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID[TIGR03102] halocyanin domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.197365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0848247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGGT CCCTCTCCAG ACGACAGCTC CTCCAGGGCG TATCGTTCGC GTCGGTCCCG 
GCACTCGCCG CCCGTCTCGG GTCCGGCCGG TCCGGCTCAC CTGCGGCGGC GACTCCGACG
CCGACGACAG CGACACCCTC GTCGACCGAC GCCCCGGTCG ACGACCTCGA CGCGTGGCTC
GCCGACGCCA ACGGCTACGA CGGCCGCTCC CGAAACGTCG GTTACGACGA CCTGGTCGAG
GTACTGGTCG GACATCCGAT AGAGGGCGAC GGCTACGCCT TCGACCCGCC GGCCGTCACC
GTCACGCCCG GCACGACGGT GGTGTGGCGC TGGCTCGACC ACGGCGGCCC ACACAACGTC
GTCGCGGTCG ACGGCAGCTT CGATAGCGGC GAGGCCACCG ACCGGCCAAA CGAGACCTAC
TCCCACCACT TCGAGACGAC CGGCGTGTAC CCCTACGTCT CCGAACCTCG GCGGGACGAC
GGACTGAAAG GCGTGATCCG GGTCCGGAAG CCGCCGGAGA GTGGCTATCC CGACCTCGAC
CACTGGCTCG TCGACGTCGA CGGCTGGGAC GGGAGCCTCG CCGACCGCAC GGACTCGGAC
GCGGTCTCTG TGACCGTCGG CAGCCCCGGT AACGGCGGTA ACTTCGCGTT CGATCCGCTC
GCAGTCAGGT GTTCGACCGG AACGACTGTC GCGTTCGAGT GGACCGGCGA CGGTGGCGCA
CACGACATCG CGTTCCAGGG CGACATCGGG ACCTCGGACA TCTACAGCGA GAGCGGCCGC
CACTTCGAAG TGACCTTCGA CGAACCGGGC GTCTACCTGT ACGCCTGCCG CCCTCACGAG
GGGATCGGCC AGCGCGGCGG CATCGTCGTC GAGGAGTAA
 
Protein sequence
MRRSLSRRQL LQGVSFASVP ALAARLGSGR SGSPAAATPT PTTATPSSTD APVDDLDAWL 
ADANGYDGRS RNVGYDDLVE VLVGHPIEGD GYAFDPPAVT VTPGTTVVWR WLDHGGPHNV
VAVDGSFDSG EATDRPNETY SHHFETTGVY PYVSEPRRDD GLKGVIRVRK PPESGYPDLD
HWLVDVDGWD GSLADRTDSD AVSVTVGSPG NGGNFAFDPL AVRCSTGTTV AFEWTGDGGA
HDIAFQGDIG TSDIYSESGR HFEVTFDEPG VYLYACRPHE GIGQRGGIVV EE