| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2671 |
|---|
| Symbol | ksgA |
|---|
| ID | 8412221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2558833 |
|---|
| End bp | 2559705 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645021016 |
|---|
| Product | dimethyladenosine transferase |
|---|
| Protein accession | YP_003178484 |
|---|
| Protein GI | 257388711 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.648539 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACCG ACGGACCGCC CTCCGAGGGG GCCGACGGCG CTCGCGATCC TGACGCGCTC
GTCGCCCGTG CGGGCAAGCG AGCGGACACC CGACAGGACC AGCACTTCTT GATCGACGAT
CGAGTTCTGG ACCGGATTCC GGGGTACGCC GACCAGATGG ACCGATCCCA CGTACTGGAA
GTCGGTGCCG GTCCCGGCGC GCTGACGGAT CGACTGCTCG CGGTCGCGGA CCGGGTAACT
GCGATCGAGC GCGATCCCGA CTTCGCGGCC CACCTCCGCG AGGAGTTCGC CGACGCCATC
GACGCCGATC GCCTGACGAT CGTCGAGGGC GACGCCCTCG ACGTGGACCT GCCCGAGTTC
TCCGCGAGCG TCTCGAATCT CCCATACGGG GCCTCCAGCG AGATCGCGTT CCGGCTGCTT
CCGCGTGGAA AGCCGCTCGT CCTGATGTTC CAGCAGGAGT TCGCCGAACG GATGGCGGCC
GATCCCGGAA GCGACGACTA CGGGCGGCTC TCGGTGACGG CAGGCCACTA CGCCGACGTC
GAGATCGTCG AGACGGTGCC GCCGACGGCG TTCGACCCAC AGCCCCGCGT CGACAGTGCC
ATCGTCCGGC TCCGGCCGCG CGAACCCGAC TACAGCGTCC CGGACGACGA CTTCTTCATG
GACTTCCTCA AGGGCGTGTT CACACAGCGT CGCAAGACGA TGCGAAACGC CGTCCGGAAC
ACGGCCCACA TCACCGACCT CGGGGATCCC GACGCCGTCG TCGACGCCGC AGACGAGTCG
CTGATGGGCA AGCGCGCGGG AGAGCTATCG CCCGCGACGT TCGCGGCGCT GGCGACACTC
GCGTACGAGA CCGGCCGACC CGGAGAGTAC TAG
|
|---|
| Protein sequence | MTTDGPPSEG ADGARDPDAL VARAGKRADT RQDQHFLIDD RVLDRIPGYA DQMDRSHVLE
VGAGPGALTD RLLAVADRVT AIERDPDFAA HLREEFADAI DADRLTIVEG DALDVDLPEF
SASVSNLPYG ASSEIAFRLL PRGKPLVLMF QQEFAERMAA DPGSDDYGRL SVTAGHYADV
EIVETVPPTA FDPQPRVDSA IVRLRPREPD YSVPDDDFFM DFLKGVFTQR RKTMRNAVRN
TAHITDLGDP DAVVDAADES LMGKRAGELS PATFAALATL AYETGRPGEY
|
|---|
| |