Gene Hmuk_2641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2641 
Symbol 
ID8412191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2532135 
End bp2533427 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content70% 
IMG OID645020986 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_003178454 
Protein GI257388681 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCCG AAATCAGTCC GTCGACGGTC GGTGGCACGG CACGAGCGCC GCCGTCGAAG 
AGTTACACGC ACCGGGCAAT TCTCGCAGCG GGATACGCCG ACGGCGCGGT CGTACACGAC
CCGCTCGTCA GTGCCGACAC GAGGGCGACG ATGAGAGCGG TCACCGCCTT CGGCGGCGGC
GTCGCGCTAC GGGACGAGGA GACGGTCCTC GACGTGACCG GCTTCGACGG GCGGCCAGAG
ACTCCCGACG ACGTGATCGA CTGTGCGAAC AGCGGCACGA CGACGCGGCT CGTCACCGCC
ACGGCCGCCC TCGGCGACGG GCTGACCGTC CTCACCGGTG ACGAGTCGCT GCGCTCCCGG
CCGCAGGGAC CGCTGCTGGA CGCCATCACG ACGGACCTCG ACGGACGCGC CGAGAGCACT
CGTGGGAACG GCCAGGCACC CCTGGTCGTC GGCGGTGCCG TCGACGGCGG CGAGGTGTCG
ATCCCCGGCG ACGTGTCCTC CCAGTACATC ACCGCGCTCC TGATGGCCGG TGCCGTGACC
GACGGGGGAA TCGACGTACA CCTCGAAACG GAACTCAAGA GCGCGCCGTA CGTCGACATC
ACGCTGGAGG TGCTTGCCGA CTTCGGGATC GAGGCCGAGG CGACGCCGGA CGGCTTCGCG
GTCCCCGGCG GCCAGTCCTA CGCGCCGACC GACGGCGAGT ACCACGTCCC CGGTGACTTC
TCTTCGATCT CCTACTTGCT GGCCGCGGGC GCACTCGCCA GCGAGGACGG ACTGACGATC
ACGTCCGCGT ATCCGAGCGC GCAGGGCGAC ACGGCGATCG TCGACATCGT CCGCGAGATG
GGTGCCGGCG TCGACTGGGA CCGCGAGGCC GGCGAGATCG AGGTCACGAG CGCACCGCTG
TCCGGCGTCG AGGTCAGCGT CGCCGACACG CCGGATCTCC TGCCCACCAT CGCGACGCTG
GGCGCGGCGG CCGACGGGAC CACGCGGATC GTCGACTGCG AGCACGTCCG CTACAAGGAG
ACCGACCGCG TCAGCGCGAT GGCCGAGGCG CTGACGAAGA TGGGCGCGAG CGTCGAGGAG
CGCCAGGAGA CGCTGACGAT CCACGGCGGC GAGAGCGACC TCCAGGGGGC GACGGTCGAC
GGGCGCGCCG ACCACCGGAT CATCATGGCG CTGTCGATCG CCGGTCTCGT CGCCGACGGG
ACGACGACCG TCGACGGCAT CGAACACGTC GACGTGTCGT TCCCGGACTT TTTCGACGTA
CTCGGCGACA TCGGTGCGGC CGTCCAGCAC TGA
 
Protein sequence
MNAEISPSTV GGTARAPPSK SYTHRAILAA GYADGAVVHD PLVSADTRAT MRAVTAFGGG 
VALRDEETVL DVTGFDGRPE TPDDVIDCAN SGTTTRLVTA TAALGDGLTV LTGDESLRSR
PQGPLLDAIT TDLDGRAEST RGNGQAPLVV GGAVDGGEVS IPGDVSSQYI TALLMAGAVT
DGGIDVHLET ELKSAPYVDI TLEVLADFGI EAEATPDGFA VPGGQSYAPT DGEYHVPGDF
SSISYLLAAG ALASEDGLTI TSAYPSAQGD TAIVDIVREM GAGVDWDREA GEIEVTSAPL
SGVEVSVADT PDLLPTIATL GAAADGTTRI VDCEHVRYKE TDRVSAMAEA LTKMGASVEE
RQETLTIHGG ESDLQGATVD GRADHRIIMA LSIAGLVADG TTTVDGIEHV DVSFPDFFDV
LGDIGAAVQH