| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2640 |
|---|
| Symbol | |
|---|
| ID | 8412190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2530689 |
|---|
| End bp | 2531936 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645020985 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_003178453 |
|---|
| Protein GI | 257388680 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGGA ACGAGTTCGG TCGGCTCTTT CGGCTGACCA CCTTCGGCGA GAGCCACGGG
GATGCGATGG GTTGTACGGT TTCAGGTGTG CCGGCGGGCG TCGAACTGTC CGAGGAAGCG
ATTCAGGAAG ATCTCGACCG GCGCAAGCCC GGTCAGTCGA TGATCACGAC CTCGCGGGGC
GAGCCCGACA AGGTGTCGAT CAAGTCCGGA CTGCAGGACG GCTACACGAC GGGAACGCCG
ATCGGCATGG TCATCCAGAA CAAAGACGCC CGATCGGGGA AGTACGAGCC CTTCATCACG
GCACCGCGGC CCTCTCACGG CGACTACACC TACTCGGCGA AGTTCGGCAC GCGCAACTGG
GGCGGTGGCG GCCGCTCGTC GGCCCGCGAG ACGGTCAACT GGGTCGCTGC CGGCGGCGTC
GCCAAGCAGG TCCTCGCACA GTCTGACTAC GACGTGCAGA TCAAGGCTCA CGTCTGCCAG
ATCGGCGACG TGGTTGCCGA CGACGTGACC TGGGAGGAGA TGCTCGAACA CAGCGAGGAC
AACGAAGTCC GCTGTGGCGA TCCCGACGCC GCCGAGGAGA TGCGCGACCT CGCGGACGAG
TACCAGAAGG AGGGCGACTC GATCGGCGGC GCGATCTACT TCGAGTGTCG CGGCGTTCCG
CGGGGCCTCG GTGCGCCGCG GTTCGATTCG ATACCCGCAC GCCTCGGGCA GGCGATGTAC
TCCATCCCCG CAGTCACGGA CTTCGAGCTG GGGATCGGGC GCGATGCTCG GACGGCCACC
GGGACCGACT ACACCGAAGA CTGGGAGTTC GGCGAGAGCG AGGCGACAGC CTCGGAAAAC
GCGAGCGGCG ACGAGCCGCG AGCGAGAGGC GACCCGAAGC CAGTCGGCAA CGACCACGGC
GGCATCCAGG GCGGGATCAC GACCGGCGAC CCGATCTACG GCGAGGTCAC CTGGCACGCG
CCGGTCTCGT TCCCGAAGAC CCAGGAGACC GTCGACTGGG AGACCGGCGA GAGAAAGGAG
ATAACGGTGA CGGGGCGACA CGACCCCGTC CTCCCGCCGC GGGCGGTCCC CGTCGTCGAA
GCGATGCTGT ACTGTACGGT GCTGGACTTC ATGCTGCTCG GTGGCCGGAT CAACCCGGAC
CGGCTCGACG ACCGGCCCGG CGAGTACGAC ACCGACTACC ACCCGTCGAG CCCGCGGAAC
GATCCCGAAG ACGCCGACAC GCACGCGACG ACCGTCGACG AGGACTGA
|
|---|
| Protein sequence | MNGNEFGRLF RLTTFGESHG DAMGCTVSGV PAGVELSEEA IQEDLDRRKP GQSMITTSRG
EPDKVSIKSG LQDGYTTGTP IGMVIQNKDA RSGKYEPFIT APRPSHGDYT YSAKFGTRNW
GGGGRSSARE TVNWVAAGGV AKQVLAQSDY DVQIKAHVCQ IGDVVADDVT WEEMLEHSED
NEVRCGDPDA AEEMRDLADE YQKEGDSIGG AIYFECRGVP RGLGAPRFDS IPARLGQAMY
SIPAVTDFEL GIGRDARTAT GTDYTEDWEF GESEATASEN ASGDEPRARG DPKPVGNDHG
GIQGGITTGD PIYGEVTWHA PVSFPKTQET VDWETGERKE ITVTGRHDPV LPPRAVPVVE
AMLYCTVLDF MLLGGRINPD RLDDRPGEYD TDYHPSSPRN DPEDADTHAT TVDED
|
|---|
| |