Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2592 |
Symbol | |
ID | 8412139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 2493036 |
End bp | 2493815 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645020934 |
Product | RNA polymerase insert |
Protein accession | YP_003178405 |
Protein GI | 257388632 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.906586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.218784 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGG ACTACGAGGT CGAGTTCGTC GAACGCTCCG ATCGCGAGGC GCGGTTCCTC GTGCGCGGGA TCAGCCCCGC CTTTGCCAAC GGCATCCGCC GGGCGATGAT CGCCGACGTG CCGACCTTCA GCGTCGATAC CGTCCGAGTC ATCGAGAACT CCAGCGTGAT GTTCGACGAG CAGATCGGAC TCCGCCTCGG GCTGGTCCCA CTCACGACCG ACCTCGACGA CTTCGAGGTC GGCGACGAAG TGACGCTGTC GATCGACGTC TCCGGTCCCG AAACCGCCTA CTCCGGTGAT CTGGTCAGCT CCGACTCCCT AGTCGGGCCG GCCGACGACA ACATCCCGAT CATCGATCTC AAGGACGGCC AGCGCCTCGA AGTCGAGGCC GACGCCGTCC TGGATCGTGG CCGCGAACAC GCCAAGCATC AGGGCGGCGT GGCCGTCGGA TACCGACACC TCCAGCGCGT CGAGGTCGTC GGCGACAAAG GCGAGTTCGA GGACGACGAG ACCCACATCC TTCGAGGCGT CATCGAGGAG CAAGCTGCCG AACACGTCGA CGGGGACGCC GATGACGGCG ACCTCGTCCT GACCGAGGAG TTCGACAGCG ACCTCACGAA GCGCTACCCC GGCAAGGAAC TGGAAGTTCA CGACGTAGAG AACGCGTTCG TCTTCCACGT CGAGACTGAC GGTTCCCTCT CCGTCGAGGA GCTCACCCTC CGCGCGGTCG ATTCGATTCG ATCCCGTGCG GACGAACTAC GCGACGCAGT CCAACTATAA
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Protein sequence | MTQDYEVEFV ERSDREARFL VRGISPAFAN GIRRAMIADV PTFSVDTVRV IENSSVMFDE QIGLRLGLVP LTTDLDDFEV GDEVTLSIDV SGPETAYSGD LVSSDSLVGP ADDNIPIIDL KDGQRLEVEA DAVLDRGREH AKHQGGVAVG YRHLQRVEVV GDKGEFEDDE THILRGVIEE QAAEHVDGDA DDGDLVLTEE FDSDLTKRYP GKELEVHDVE NAFVFHVETD GSLSVEELTL RAVDSIRSRA DELRDAVQL
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