Gene Hmuk_2575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2575 
Symbol 
ID8412121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2479022 
End bp2480863 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content68% 
IMG OID645020916 
ProductCarbamoyl-phosphate synthase L chain ATP- binding 
Protein accessionYP_003178388 
Protein GI257388615 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID[TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACA AGGTTCTCGT TGCGAACCGC GGCGAGATCG CGGTTCGGGT CATGCGGGCC 
TGCGAGGAAC TGGGGGTCGA AACCGTCGCA GTCTACTCCG AAGCCGACAA GCACTCGGGC
CACGTCAGAT ACGCCGACGA GGCGTACAAC GTCGGCCCGG CCCGCGCGGC CGACTCGTAT
CTCGATCAGG AGGCGATCGT CGACGCCGCC CGACAGGCCG ACGCCGACGC GATCCACCCC
GGCTACGGCT TCCTCGCGGA GAACGCCGAC TTCGCGGCCC GCGTCGAGGC CGCCGACGGC
ATCACCTGGG TCGGTCCGGA GAGCGACTCG ATGGAGTCGC TCGGCGAGAA GACGAAGGCC
CGCACGATCA TGTCGTCGGC CGACGTGCCC ATCGTTCCGG GGACGACCGA CCCGGTGACC
GAGCCCGAAC AGGTCCACGA GTTCGGTGAC GAGAACGGCT ATCCGATCGC CATCAAGGCC
GAGGGCGGCG GCGGCGGCCG CGGCATGAAG ATCGTCGAGA GCCCCGACGA AGTCGAGGAT
CAGCTCGAAT CGGCCAAACG AGAGGGCGAG GCGTACTTCT CGAACGACTC CGTCTACCTC
GAACGCTACC TCGAAAATCC GCGCCACATC GAGGTCCAGA TCATCGCCGA CCACCACGGC
AACGTCCGCC ACCTGGGCGA GCGCGACTGC TCGCTCCAGC GCCGCCACCA GAAAGTCATC
GAGGAGGGGC CCAGTCCCGC CCTGTCGGAC GAACTCCGCG AGGAGATCGG CGAGGCCGCT
CGCCGGGGCG TCTCCGAAGC CGGCTACTAC AACGCCGGCA CCGTCGAGTT CCTCGTCGAG
GAGCAAGACC GCGAGCCGGG CGAACTGCTC GGTCCCGACG CGGACTTCTA CTTCCTCGAA
GTGAACACGC GCATCCAGGT CGAGCACTGC GTCACCGAGG AGATCACGGG GATCGACATC
GTCAAGTGGC AGCTCAGGGT CGCCGCCGAC GAGGTGCTCG GCTTCGCCCA GGACGACGTG
ACGGTCGACG GCCACGCCAT CGAGTTCCGA ATCAACGCGG AGAACGCCGC CGACGACTTC
GCGCCCGCCA CCGGCGGCAC CCTCGAAACG TACGATCCGC CCGGCGGCGT CGGCGTCCGG
ATGGACGACG CGCTGCGCCA GGGCGACGAG CTGGTGACCG ACTACGACTC GATGATCGCG
AAGCTCATCG TCCACGCGGG CGACCGCGAG GAGGCCATCG AGCGGGGCAA GCGCGCGCTG
GGCGAGTACG ACATCGAGGG GATCCCGACG ATCGTCCCCT TCCACCGCCT GATGCTCACC
GACGACGAGT TCGTCCAGGG CATGCACACG ACGAAGTACC TCGACGAGAC GCTCGACCCC
GAGCGCATCG ACGCCGCACA GGAGCGGTGG GGGACCGAGA CGACGAGCGA CGCGGACGAC
GAGGAGGTGA CCGAGCGGGA GTTCACCGTC GAGGTCAACG GCAAGCGCTT CGACGTGGAA
CTCGAAGAGC GCGGCGCACC GCCGATCGAG GTCGGCGAGG TGCAGGGCGG CGACGGCGGC
GACCGCCCCC AGCGACCCGG CAGTGGCGGC TCGGATTCGG GCGGCGACGG CGGCGGAGCC
AGCGCCGAAG GCGACGAAGT GACCGCGGAG ATGCAGGGCA CGATCCTCGA AGTCAACGTC
GAGGAAGGAG ACGAGGTCGA GGCCGGCGAC GTGGTCTGCG TGCTCGAAGC GATGAAGATG
GAGAACGACA TCGTGGCCGA GCGCGGCGGG ACCGTCACCC AGGTCGCCGT CGGCGAGGGC
GAGTCCGTCG ACATGGGCGA TCTCCTGTTC GTCGTCGGGT GA
 
Protein sequence
MFDKVLVANR GEIAVRVMRA CEELGVETVA VYSEADKHSG HVRYADEAYN VGPARAADSY 
LDQEAIVDAA RQADADAIHP GYGFLAENAD FAARVEAADG ITWVGPESDS MESLGEKTKA
RTIMSSADVP IVPGTTDPVT EPEQVHEFGD ENGYPIAIKA EGGGGGRGMK IVESPDEVED
QLESAKREGE AYFSNDSVYL ERYLENPRHI EVQIIADHHG NVRHLGERDC SLQRRHQKVI
EEGPSPALSD ELREEIGEAA RRGVSEAGYY NAGTVEFLVE EQDREPGELL GPDADFYFLE
VNTRIQVEHC VTEEITGIDI VKWQLRVAAD EVLGFAQDDV TVDGHAIEFR INAENAADDF
APATGGTLET YDPPGGVGVR MDDALRQGDE LVTDYDSMIA KLIVHAGDRE EAIERGKRAL
GEYDIEGIPT IVPFHRLMLT DDEFVQGMHT TKYLDETLDP ERIDAAQERW GTETTSDADD
EEVTEREFTV EVNGKRFDVE LEERGAPPIE VGEVQGGDGG DRPQRPGSGG SDSGGDGGGA
SAEGDEVTAE MQGTILEVNV EEGDEVEAGD VVCVLEAMKM ENDIVAERGG TVTQVAVGEG
ESVDMGDLLF VVG