| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2563 |
|---|
| Symbol | |
|---|
| ID | 8412108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2466642 |
|---|
| End bp | 2467679 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645020903 |
|---|
| Product | aspartate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_003178376 |
|---|
| Protein GI | 257388603 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00978] aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0216406 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTAC GTGTAGGTGT TCTGGGGGCC ACTGGTGCGG TCGGTCAGCG ACTCATCCAG
TTGCTCGAAC CGCACTCCGA TTTCGAGATC GCAGCACTGA CTGCCAGCGA ATCCAGTGCC
GGCAAGGCGT ACCGAGAGGC GGCCAAGTGG CGCATCGACG CGCCGATTCC CGAGGACGTG
GCCGAGATCG AAGTCGGCGC GACCACGCCC GAGGACGTGC CCGACGACGT GGACCTGATC
TTCTCGTCGC TCCCCTCCGG CGTCGGTGCC GAGGTCGAAC CCGAGTTCTG CGAGGCGGGC
TACGTCGTCT CCTCGAACTC CTCGAACGGC CGCATGGACG AGGACGTGCC GCTCGTGATC
CCCGAGGTCA ACGCCGATCA CCTCGACGTG CTCGAACGCC AGCGCGAGGA ACGCGGCTGG
GACGGTGCGC TCCTGAAGAA CCCGAACTGC TCGACGATCA CGATGGTGCC GCCGCTGGCG
GCACTGGACG AGGCCTTCGG TCTGACTGAC GTGCGCGTCT CGACGCTACA GGCCGTCTCC
GGGGCGGGCT ACGACGGCGT CACGTCGATG GAGATCATCG ACAACGCGAT CCCGCACATC
GGCGGCGAGG AGGAGAAGAT GGAGACCGAG TCTCGGAAGC TGCTGGGCGG CTTCGACGGC
ACGGCGATCG AACTCCACGG GATGGACGTG GCGGCCTCCT GTAACCGCAT CGCGACGCTC
GACGGCCACC TCGAGAACGT CTGGGTCGAC ACCGAAGACG ACGTGACTGT CGCCGACGCC
GAGGACGCGC TGCGGTCGGC GGAGGGCATC GACCTGCCGT CCTCGCCCGA CCAGCTGATC
CGGGTCTTCG ACGAGCCTGA CCGGCCACAG CCCCGCCTCG ACCGCAACAT CGAGGACGGG
ATGGGCGTCG CAGTCGGCGG CGTCCAGGAG ACGACCGACG GACTTCAGTT CAACTGTCTC
GCTCACAACA CGATGCGGGG CGCTGCGGGC GCGAGCGTCC TCAACGGCGA ACTGCTGGCG
GCCAACGGCT ACCTGTAG
|
|---|
| Protein sequence | MTVRVGVLGA TGAVGQRLIQ LLEPHSDFEI AALTASESSA GKAYREAAKW RIDAPIPEDV
AEIEVGATTP EDVPDDVDLI FSSLPSGVGA EVEPEFCEAG YVVSSNSSNG RMDEDVPLVI
PEVNADHLDV LERQREERGW DGALLKNPNC STITMVPPLA ALDEAFGLTD VRVSTLQAVS
GAGYDGVTSM EIIDNAIPHI GGEEEKMETE SRKLLGGFDG TAIELHGMDV AASCNRIATL
DGHLENVWVD TEDDVTVADA EDALRSAEGI DLPSSPDQLI RVFDEPDRPQ PRLDRNIEDG
MGVAVGGVQE TTDGLQFNCL AHNTMRGAAG ASVLNGELLA ANGYL
|
|---|
| |