Gene Hmuk_2560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2560 
Symbol 
ID8412105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2463809 
End bp2464765 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content69% 
IMG OID645020900 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_003178373 
Protein GI257388600 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.24265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAAGA TCGCCATCCT GCGGCAGAAA GCACACGGCC TGCCGGTCGA ATCGTACGCC 
GACGCGGTCC GCGAGCGACT GCCCGAGGCG ACAGTTACGG TCGCCCGGAC GCCCGAGCAA
GAGCGAGCGG CCGTCGAGAC GGCGACGGTG ATCTCGGCCG GGCCGTTCGA CGACGAACTG
CTCGGTCACG CGAACGAGAT CCAGCTGTTC GCCAGCATCT ACGCCGGCTA CGACCACCTG
CCCCTCGACG AGTTCGCCGA GCGAGAGATC GCGTTGACGA CGGCCTCGGG CGTCCACGGC
CCGAACATCG CCGAGCACGT GATCGGCGCG TTTCTCGCCT TCACGCGGCG CTTCTTCGAA
GCGCGTCGCC GCCAGCGAGA GCGACAGTGG CGCGCCCTCC GGTCGAGCGA ACTCGCCGGT
TCGACGGTGG CGGTCGTCGG ACTCGGCGCT ATCGGCCAGG CCATCGTCGA CCGACTCGCG
GGGTTCGACG TCGACACCGT CGGCGTCCGC TACAGCCCGG AGAAAGGCGG ACCGACCGAC
GAAGTGTACG GCTTCGACGA GATCCACGAA GCTGTCACCG ACGCCGAGTA CGTCGCCGTC
GCGTGCCCGC TGACCGACGC GACCGAGGAG CTGTTCGACG AGCAACTGTT CCGCACGATG
CACCCCGAGG CGATCTTCGT CAACGTCGCC CGCGGCGGCG TCGTCGACAC CGACGCGCTC
ACGTCGGCGA TCCAGAGCAA CTACATCGGC GCGGCACAGC TAGACGTGAC CGACCCGGAG
CCGCTGCCCG AGGACCACCC GCTGTGGGGC TTCGACAACG TCTTCGTGAC GCCCCACGCC
TCCGGCCACA CGCCCGCGTA CTACGAGCGC ACGGCCGACA TCCTCGCCGA GAACGTCAGG
CGCGCCGAGG AGACCGGCGA GTGGGACGGA CTGGTGAATC AGGTCAACCT CGGCTGA
 
Protein sequence
MSKIAILRQK AHGLPVESYA DAVRERLPEA TVTVARTPEQ ERAAVETATV ISAGPFDDEL 
LGHANEIQLF ASIYAGYDHL PLDEFAEREI ALTTASGVHG PNIAEHVIGA FLAFTRRFFE
ARRRQRERQW RALRSSELAG STVAVVGLGA IGQAIVDRLA GFDVDTVGVR YSPEKGGPTD
EVYGFDEIHE AVTDAEYVAV ACPLTDATEE LFDEQLFRTM HPEAIFVNVA RGGVVDTDAL
TSAIQSNYIG AAQLDVTDPE PLPEDHPLWG FDNVFVTPHA SGHTPAYYER TADILAENVR
RAEETGEWDG LVNQVNLG