| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2534 |
|---|
| Symbol | |
|---|
| ID | 8412078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 2440230 |
|---|
| End bp | 2441177 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645020875 |
|---|
| Product | heat shock protein DnaJ domain protein |
|---|
| Protein accession | YP_003178349 |
|---|
| Protein GI | 257388576 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00380057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.256063 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAGA CGTTCTACGA CGTGCTCGGG GTCGAACCAG ATGCCACCGC GAGCGACATC
GAGGACGCCT ATCGCGAGCG ACTGAAGGAG ACCCATCCGG ACCACAACGA CGACGCCGAC
GCCGACGAGG CCACCCAGCG CGTGATCGAG GCCCGCAACG TGCTGACCGA CGACGACGAG
CGCGCCCGCT ACGATCGACT CGGACACGAC GCGTACGTCG GCGCGGACGC GGCGGGGAGC
GATCACCACG ACGCCCGCGG CGCGGCGGCC CGTGCGGCCC GCGAGGCCGG CTGGGCGGAC
AGCGAGACGG ACGGTCCCAG CGAGTCGACT GCCGCGGGCA CGAACGCGGG GCCCTCCGAG
CGGCGACGCC GGGAGCGAAC GGCAAGCGAA CGCGTTCGTG AGACGCGCAC GGCGGCGTCG
AGTGGTGCAA CTGGAGCCAC CGCGACCGGA CAGACGACGG CGGGCACGTC GCCCGATAGT
GGCGCGTCGA CGGGCCGGAC GCGCCCGACG GGCACTTCGA CCCGTGACAG CCGCCAGCGC
GACCGGATTT ACGGTGCAGG TACCGACAGC GGCGAGGTGG CGTACAACGT CAGACACGAC
GTGAGTTCGA GCGGTCACTC GCTGCGGGCG TTCGTGGCCG ACACGCCGCT CTCACTCGCC
GCGCTGACGT TCGTCCTCTA TCCGATCATG GTGGCGTCCA CGATGTTCCC AGACTTCCCA
CTGGTGGTCA ACGCCACCGT CGGCCTGTGT GCCCTGCTGT TGATCGGCTA CCTCCAGTCC
CAGCCGTCGG TGGGCGTCCT CGTCTTCGGG ACCTGGAGCG TCCTGGTGCC CCTCGCACTC
GTCGCGTTCG GCGTCCCGGT GACCGGGCTC GTCGGGCTCG CAGCGCTCGG GAGCGTCTGG
CTGCCCTTTG GCTTCTCGTT GCTGACCCGC TCGGTCGTGG GGCCGTAG
|
|---|
| Protein sequence | MTETFYDVLG VEPDATASDI EDAYRERLKE THPDHNDDAD ADEATQRVIE ARNVLTDDDE
RARYDRLGHD AYVGADAAGS DHHDARGAAA RAAREAGWAD SETDGPSEST AAGTNAGPSE
RRRRERTASE RVRETRTAAS SGATGATATG QTTAGTSPDS GASTGRTRPT GTSTRDSRQR
DRIYGAGTDS GEVAYNVRHD VSSSGHSLRA FVADTPLSLA ALTFVLYPIM VASTMFPDFP
LVVNATVGLC ALLLIGYLQS QPSVGVLVFG TWSVLVPLAL VAFGVPVTGL VGLAALGSVW
LPFGFSLLTR SVVGP
|
|---|
| |