Gene Hmuk_2530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2530 
Symbol 
ID8412074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2436272 
End bp2437468 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content68% 
IMG OID645020871 
Productinner-membrane translocator 
Protein accessionYP_003178345 
Protein GI257388572 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.104634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.427798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATCTCG TCGTCGTCGG GCTGCTGGCG TGTTACCCCG CGATCTATCA CCTCCTGACC 
CACTCGCCAC TGGGCGAGGT GGCCGTCACC GTCCTCCCGC GGATGGAGAC GATGGTCGCC
GTGCTGTACT TCTCTCTCTT TGCGATGTCG TTCGACTTCA TCAGCGGCTA CACCGGCTAC
CTCTCGTTCG GCCACGCGGC GTTCTACGGC ACCGGCGCGT ACACCGTCCT CCTGATCGCC
AACGGGAAGG TCCCGCTCTT GGGTCCCGAG ACGCCGTTCC TGGTGGCACT CGTCGTCGGC
GCGGTCCTCG CGACGGTGCT CGCGGTGGTG ATCGGCCTGG TCTCGTTCAG GCTGACCGGG
GTCTACTTCG CGATGATCAC CCTCGGTTTC GCACAGGTGC TGTACGTCTT CGTCCGGGAC
TGGGACTACG TCGGCTCGAA CCCCCGTGAC GGGATCGCGC TGAGCGGAGC CCGCGGCTTC
GAGCTGGGCG TGCCCTACGT CGATCAGCTG ACCGTCTCGC TGGGCACGCT GACCGGCGAC
ACGCTGGCGC TCGCGGGCCA CACCCTCGGG ACGACGACGG TCTCCTTTTA CGCCGTGGGT
GTCGTCGTCC TCCTGTGTTT CGCGGCGATG CAGCGGATCC TCCACTCGCC CTTCGGCCGC
GTCATGGTCG CGATCCGCGA GAACGAGGAC CGCGCCGAGG CCATCGGTTA CGACACCTTC
CGCTACAAGC TGGGCGCGTT CGCGATCAGC GGCTTCTTCG GCGGCGTCGC CGGGGGACTG
CTCGCGGGGT TCAAACGCTC CGTGACCCCC GAGTCCGGGT TCTACTTCCT GACCAGCGGC
GACGCGCTGC TGGCCAGCAT CATCGGCGGA TTCGGGACCC TCGCCGGCCC GCTCTGGGGC
CACCTGTTCG ACGAGACCGT CCGGGAGTTC CTCTCGAATC GGGGCCAGGG CGGCGGCCTG
CTCCCGTATC TGGAACAGAC GCTCTCGGAG GAGTTTCTGA CGACCGAACT CGTCGGCGGG
CTCACGGTCG AGGGCTTCAT CACCGCCGCG CTGAACGGCC ACGCGAGCCT CTACGTCGGT
ATCGTCTTCG TCCTGTTCGT CCTCTACGTC CCCGACGGGA TCGTCGGCAC GGTCCGCTCG
CGGCTGGGCG GTCGGGTCGC GCGGCGGCTC CCCGAACGGC TGTGGGGTGA GCGGTGA
 
Protein sequence
MYLVVVGLLA CYPAIYHLLT HSPLGEVAVT VLPRMETMVA VLYFSLFAMS FDFISGYTGY 
LSFGHAAFYG TGAYTVLLIA NGKVPLLGPE TPFLVALVVG AVLATVLAVV IGLVSFRLTG
VYFAMITLGF AQVLYVFVRD WDYVGSNPRD GIALSGARGF ELGVPYVDQL TVSLGTLTGD
TLALAGHTLG TTTVSFYAVG VVVLLCFAAM QRILHSPFGR VMVAIRENED RAEAIGYDTF
RYKLGAFAIS GFFGGVAGGL LAGFKRSVTP ESGFYFLTSG DALLASIIGG FGTLAGPLWG
HLFDETVREF LSNRGQGGGL LPYLEQTLSE EFLTTELVGG LTVEGFITAA LNGHASLYVG
IVFVLFVLYV PDGIVGTVRS RLGGRVARRL PERLWGER