| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2527 |
|---|
| Symbol | |
|---|
| ID | 8412071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 2433670 |
|---|
| End bp | 2434470 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645020868 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003178342 |
|---|
| Protein GI | 257388569 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.727233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.57543 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGGA CGCGGGGACT CACGAAGCGG TTCGGCGGCA TCACGGCGGT CGACGGCGTC
GACTTCGACC TCGGGTCGGA GCTGTGCTCG CTGATCGGGC CCAACGGCGC GGGCAAGACG
ACGTTCTTCG ACCTGCTGAC GGGCGAACTG GAGCCGACAG ACGGACGGAT CGAGTTCCGT
CACGACGGCG AGTGGGTGGA CGTGACGGCG ACGCCCCCGT CCGAGATCGC GAGCCTCGGC
GTCCACCGCT CGTACCAGAT CACGAACGTC TTCCCGACCT CGACGGTGCT CGAAAACGTC
AGGGTCGCCG TACAGGCCCA CAGCGACCAC TCGGCGACGT TCTGGCGGAC AAGCGACGCC
TACGAGGCGG ATCTGACCGC GGCTCGCGAC ATCCTCGAAC GGGTCGGGCT GTCCGAGCGG
GCCGACGACC TCGCTCAGAA CCTCAGCCAC GGAGCGGGCC GACAGCTCGA AGTGGCGATC
GCGCTGGCCG GCGACCCGGA CGTGCTCTTG CTCGACGAAC CGAACGCCGG TGTCAGCTCC
GAGAGCGTCG ACGACATCGT CGCGCTCATC GAGGACGTGG CCCGGGACCA CGCGGTCCTG
CTCGTCGAGC ACAACATGGA CATCGTGATG GAGGTCTCGG ACCGCGTGGT CGTCCTGAAC
CAGGGCTCGG TGATCGCCGA CGGCGATCCC AGCGACGTGC GGGCCGATCC GGCCGTCCAG
GAGGCGTATC TCGGCGGCTA CGAGACCGGC GACCTGGCCG AAGACGGCGA CGAGCCGGGC
GAGCCCGAGG GGGTCGCGTA G
|
|---|
| Protein sequence | MLRTRGLTKR FGGITAVDGV DFDLGSELCS LIGPNGAGKT TFFDLLTGEL EPTDGRIEFR
HDGEWVDVTA TPPSEIASLG VHRSYQITNV FPTSTVLENV RVAVQAHSDH SATFWRTSDA
YEADLTAARD ILERVGLSER ADDLAQNLSH GAGRQLEVAI ALAGDPDVLL LDEPNAGVSS
ESVDDIVALI EDVARDHAVL LVEHNMDIVM EVSDRVVVLN QGSVIADGDP SDVRADPAVQ
EAYLGGYETG DLAEDGDEPG EPEGVA
|
|---|
| |