Gene Hmuk_2517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2517 
Symbol 
ID8412061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2419653 
End bp2420921 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content70% 
IMG OID645020858 
Productanaerobic glycerol-3-phosphate dehydrogenase subunit B 
Protein accessionYP_003178332 
Protein GI257388559 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3075] Anaerobic glycerol-3-phosphate dehydrogenase 
TIGRFAM ID[TIGR03378] glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.113743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTG ATTCGGAGGT GCTGGTCGTC GGCGGCGGGC TCGCGGGCGT GACGAGCGCG 
GTCGCGGCCG CCCGCGCGGG TGCGGACGTG CGCCTGGTCT CCTACAAGCA GAGCTCGCTC
CGGCAGGCCT CCGGGCTGAT CGACGTGCTC GGCTACGTCG GCGACGAGGT CGTCGTCGAT
CCGTACGACG CGATTCCGGA GCTCCACGAA GACCACCCCT ACCGTCTCGT GGGCGTCGAG
ACGGTTCGGG ACGCGATGGC GCTGTTCGAC GAGACCGTCG ACGGCTACCA CGGCGACCAC
ACCGAGACCA ACGCACTGCT CCCGACCCAC GGCGGGACGG TCAAGCCGAC CGCGCGCTAC
CCCGCCGGAG CCGCCGAGGG CGTCGCCAGC GACGACCGGG ACACGCTCCT TGTCGGCTTC
GAGCGGCTGG TCGACTTCGA CGCACCGCTC GCCGCGAGTC ACGTCGAGGC CGCGGGCGCG
CCGTTCTCGG CCGACGGCGT GACGATCACG TTCCCGGGAG ATCTCCAGGC CGACGCCAAG
GTCACTCGGT ACGCGAAGCT GCTCGACCAG AACAGTCCCG TCGCAGTCGA CGGCCAGAAG
GTCGACACCC GGACCGCGCT CGCCGAACGG ATCGCCCCCC ACCTCGACGG CCACGAACGC
GTCGGCTTCC CGGCGGTGCT GGGCGACGAT CACACCGACG CGGTGCGGGC GACGCTGGCC
GAGGAGCTCG GGGTGGCCGT CTTCGAAGTC CCGATGGGGC CGCCCTCGCT GCCGGGACTG
CGCCTCGAAG ACCGTCTCTT CGAGGCGCTC GACCGGTCCG GCACGCGCTA CGAGGTCGGC
AACCCCGTCG TCGACTACGA GGGCGAGGAT CGGATCGAAC GCGTGGTCGT CGAACGGAAC
GGCTCTCGGG TCCCCTACAG CGCCGACCAG TACGTCCTCG CGACGGGCGG GCTGGTCAGC
AAGGGCGTCG AGAGCGACCG CGAGGGCGTT CGAGAGCCGA TCTTCGACTG TCACGTCCCA
CATCCGAAAG ACCGGTACGA CTGGTTCGAA GACGGCGTGT TCGACGACCA CGCGTTCGCG
CGCTTCGGCG TCGACGTTGG GAGCGACTTG CGGCCACGTG CGGCCGGCGG AAGCGTGGAG
TTCGAGAACC TCAGAGCGGC TGGGGCGACG ATCGGCGGCT ACGACTTCGC GGCCGAGAAG
TCCGGCAGCG GCGTCTCGAT CGCGACCGGC TACGCGGCCG GGAGAGCGGC GACGGAGGAT
CTGACATGA
 
Protein sequence
MAIDSEVLVV GGGLAGVTSA VAAARAGADV RLVSYKQSSL RQASGLIDVL GYVGDEVVVD 
PYDAIPELHE DHPYRLVGVE TVRDAMALFD ETVDGYHGDH TETNALLPTH GGTVKPTARY
PAGAAEGVAS DDRDTLLVGF ERLVDFDAPL AASHVEAAGA PFSADGVTIT FPGDLQADAK
VTRYAKLLDQ NSPVAVDGQK VDTRTALAER IAPHLDGHER VGFPAVLGDD HTDAVRATLA
EELGVAVFEV PMGPPSLPGL RLEDRLFEAL DRSGTRYEVG NPVVDYEGED RIERVVVERN
GSRVPYSADQ YVLATGGLVS KGVESDREGV REPIFDCHVP HPKDRYDWFE DGVFDDHAFA
RFGVDVGSDL RPRAAGGSVE FENLRAAGAT IGGYDFAAEK SGSGVSIATG YAAGRAATED
LT