Gene Hmuk_2508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2508 
Symbol 
ID8412052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2405310 
End bp2407193 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content64% 
IMG OID645020849 
Productputative methyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003178323 
Protein GI257388550 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CAGAGTCGTC TTCCGAAGGT ATTCTCCAGA AGATCACGCC CAACTTCCTC 
AGGCGGAGCT TCGCACTGAA GTTCGGGCTC GTCCTGCTGG TGATGGGGCT GTCGGTCGGC
ATCATCGGGT TCGCGGCGAC CGAAGAGGTC CGGACCCAGA CACAGGACAA CGTCGAAGGA
CAGTTCCAGA ACACGGCCGT CCAGCAGAGT GACATCGTCG AGCAGTGGGT CACGCAGAAC
AAGCTGTCGA CGAAGCTCAT CTCCAATCAG GACCAGTGGG GTGACGACGA GGCAGATCTC
GAACTCGCTC TCCAAAACGA GCTGTCGCGG CTGTCGGCCG ACGCCAAGAA CGTCCACCTG
CTGGAGACGA CGCCGTCGGG ATCGTCCGTC GTCGCCAGTA CGAGCCTCCG TGCGGACTCG
TCGGCGTTGT CCGGGAACCT CCAGTGGACG TCCGAGACGG AGCTCAGCGA CACCAGTCGG
GTACTCGTCT CCGACGCCTA CCGCGACAGC CAGGACAGCG AATCGACCAT CGGGTTCGCC
AGCCCGGTGC CGGCCTCCCA GAACCGCATC CTGGTCGTCG AGTACCGGCT CGACGAACTC
GCCGACTCGA TCAGTCCGGC CGAAGACGAG TCCGCGCGAT TCACACAGGT CGTCGACAGC
CACCGCACGG TCGTCGTCGA CCAGGCCTAC GCCAGCAACA GCGACCGAGA GGGGATGACG
CTGTCGACGT ACCCCGTCCA GCAGACGGTC GACGACGCGA ACGCCCTGCG GGGCACACAG
GAGAGTGCCA GCGTCAAGAC GACGATGGCA CCGAACGCCG ACCTCGGACT GAACGAGGAG
TACACAGTCG GCTACGCGCC GGTCTCTGGG ACTGACTGGG TCGTCCTGAC CCACGCACCG
TCCTCGACGG TGTTTGGCTT CGTCGAGGAC GTGCAGCTGT ACGGCCTGAT CGCGACGGCC
GGTCTGGTCG TCTTCATCGG CGGTATCGGT GCGGCCCTCG GCTGGAGCAC CTCGTCGTCG
ATCGATACGC TCACCCGGAA GACCGAAGAG ATGCGGGAGG GCAATCTCGA CGTCGAACTG
GACACGTCAC GGATCGACAA CATCGGTCGG CTGTACGACG GCTTCGCCGA CATGCGCGAC
GCGCTCAGAG AGCAGATCGA CGAAGCCGAG CGCGCACGCA AAGAGGCCGA GGTCTCGCGC
GCGGAAGCAA TGGAGATGAG CAACTACCTC CAGGAGAAAG CCACCGAGTT CTCCGTCGCC
ATGGAGAAGA CCGCAGGCGG GGACATGACC ACGCGAATGG AGCAGGACGG CGAGAACGAA
GCGATGGACA CGATCGCGAG CGAGTTCAAC GCCATGATCG AGGAGTTGGA GAAGACGACC
GGCCAGCTCA AGAGCTTCTC CGAAGAGGTC GCGGAATCCG GTGACGTGGT GCTGCAAAGT
GCCGAGTCTG TCCGTGACGC CTCCGAACAG GTCGCCGAGT CCATCCAGAA GATCTCCGAC
GACGCCTACG AGCAGAAAGA CCAGCTACAG ACGATCTCCG AGGATCTCGA CGAACTGGTC
GAGACGCTCG AAGCCCTCGA AGCGGAGCAG CAAGCAGTCG ACCTCGGCGA CTCGCTCACC
CAGTTCCGCA CCGTCGCGAC CCAGCTGCAG GAGGCCGCAG ACACCAGCGA GCAGATGATG
TCCGAGTCCG AGACCGTCGC CGGTGCCGCG GAGGAACAGG CCGCCGAACT CAACGAAGTA
TCCTCGCGCG CCGAACAGCT GAAACGGTAC GCTCGACCGC TCGGGGACAT CCTCGACCGC
TTCGAGACGG AAGCCGAACA CGAGTTCGTC TTCTCCGGCG GACCGTCACA GACGACGCGC
ACGCAAGAAG AGAGCGAAGA GTGA
 
Protein sequence
MSDTESSSEG ILQKITPNFL RRSFALKFGL VLLVMGLSVG IIGFAATEEV RTQTQDNVEG 
QFQNTAVQQS DIVEQWVTQN KLSTKLISNQ DQWGDDEADL ELALQNELSR LSADAKNVHL
LETTPSGSSV VASTSLRADS SALSGNLQWT SETELSDTSR VLVSDAYRDS QDSESTIGFA
SPVPASQNRI LVVEYRLDEL ADSISPAEDE SARFTQVVDS HRTVVVDQAY ASNSDREGMT
LSTYPVQQTV DDANALRGTQ ESASVKTTMA PNADLGLNEE YTVGYAPVSG TDWVVLTHAP
SSTVFGFVED VQLYGLIATA GLVVFIGGIG AALGWSTSSS IDTLTRKTEE MREGNLDVEL
DTSRIDNIGR LYDGFADMRD ALREQIDEAE RARKEAEVSR AEAMEMSNYL QEKATEFSVA
MEKTAGGDMT TRMEQDGENE AMDTIASEFN AMIEELEKTT GQLKSFSEEV AESGDVVLQS
AESVRDASEQ VAESIQKISD DAYEQKDQLQ TISEDLDELV ETLEALEAEQ QAVDLGDSLT
QFRTVATQLQ EAADTSEQMM SESETVAGAA EEQAAELNEV SSRAEQLKRY ARPLGDILDR
FETEAEHEFV FSGGPSQTTR TQEESEE