Gene Hmuk_2484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2484 
Symbol 
ID8412028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2380268 
End bp2381329 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content70% 
IMG OID645020825 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_003178299 
Protein GI257388526 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC AGCAGACGCG TCGTGGCGTG TTGGGTTCGA TGGCGGCGGC CGTCGGTGCC 
AGCGTCGCGG GCTGTCAGGC CCCCGCGCTG GACGCGACCG CCGGCTCCGA GGGGCAATCG
GCCAGCGACG GCTACAGCGC CGTCTACGAG CAGGTGGTCG ACTCCGTCGC GACGGTCCGT
ACGTACACCG AGAACAGTCG CGGCGGTCAG GGGAGTGCGT TCGTCTACAG CGACGACTAC
CTCGTGACCA ACGAACACGT CGTCGGTGAC GCCGACGAGA TCTACGTCCG CTACCGCGAG
TCGGGCTGGA TCGAGTCCGC CGTCGTCGCC GTCGACGCCT ACAGCGATCT GGCCGTCATC
GAGGTCACCG ACAAACCGGC GAGTGCCACG CCGCTGTCCT TCGTCGAGGC CGACCCCGGC
GTCGGGACGG AGGTGGTCGC CATCGGCAAC CCGTTCGGGC TCTCGGGCTC GGTCTCGGCC
GGGATCGTCA GCGGCGTCGA CCGGACGCTC CCGGCGGCGA ACGGCTTCTC GATCCCCGAC
GCCGTCCAGA CCGACGCGGC GGTCAATCCG GGCAACAGCG GCGGCCCGCT GGTCACGCTC
GACGGGACGG TCGTCGGCGT CATCAACTCC GGCGGGGGCG ACAACATCGG CTTCGCCATC
TCGGCGGCGC TCACCCGCAG GGTCGTCCCG TCGCTGATCG ACTCCGGGGC CTACGACCAC
TCGTACCTCG GCGTCCGGCT GACCGATCTG ACGCCGCCGA TCGTCGAGGC AAACGACCTC
CGGACGGCCG AGGGCGTCTA CATCGACGAA GTCGTCACGG ACGGACCCGC CGAGGGCGTC
CTGGAGCCGT CGAACGGCGA AGAAGTCGTC AACGGCGTCA GAGTCGGCGT CGGCGGCGAC
GTGGTCGTGG CGATGGACGA GACCCCGACT CCCTCCCGGC AACACCTCTC CTCGTTTCTC
GCACTGGAGA CGACGCCGGG CGACACGATC GCCGTCGACG TACTCCGCGA GGGATCCCGA
GAGACGGTCG ATCTCACGCT GGGCGAGCGA CCGGAGAGAT AG
 
Protein sequence
MDDQQTRRGV LGSMAAAVGA SVAGCQAPAL DATAGSEGQS ASDGYSAVYE QVVDSVATVR 
TYTENSRGGQ GSAFVYSDDY LVTNEHVVGD ADEIYVRYRE SGWIESAVVA VDAYSDLAVI
EVTDKPASAT PLSFVEADPG VGTEVVAIGN PFGLSGSVSA GIVSGVDRTL PAANGFSIPD
AVQTDAAVNP GNSGGPLVTL DGTVVGVINS GGGDNIGFAI SAALTRRVVP SLIDSGAYDH
SYLGVRLTDL TPPIVEANDL RTAEGVYIDE VVTDGPAEGV LEPSNGEEVV NGVRVGVGGD
VVVAMDETPT PSRQHLSSFL ALETTPGDTI AVDVLREGSR ETVDLTLGER PER