Gene Hmuk_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2460 
Symbol 
ID8412004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2357743 
End bp2359521 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content66% 
IMG OID645020801 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003178275 
Protein GI257388502 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.814003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.142191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGCA CACCTATGCT CTCGACGCTC GTCGGTTGGT ACAAGCGCCA GATACGCAGG 
TCGCTGACAC TCGTCGGTGT CGACAAGTCC CTGGAACGAA AGATCATCGC TGCCGTCGCG
ATTCAGTTCG GTGTCTCGCT GACGCTCGTC GTCGTCTCGC TGTTTCTCTC GGGGATCACG
CAGTTCGCGC TGACGATCGC TCTGTTGCTC GGTGCCGTGC TCGTCTTCGT GAACACGATC
TTCATCACGA GAGAGGACAT CGTCGGCCCC ATCACGACGC TGGCAGACCG CGCGGACGCG
ATCGCCAGCG GGACCGTCGA CATCGACGTA CCGGACAGCG ACCAGCCCGA CGAGATCGGG
ACGCTCGTGT CCTCGTTCTC GCGCGTTCAC GGCTACTTCG ACACCGTCTC CCGGCAGGCG
GACGCCCTCG CTCGCCAGGA GTTCGACGCG GCTGCACTGG ACGAAGAAGT GCCCGGAGAG
ATGGGCGAGT CGCTCGATCA CATGGCGGAC AATCTGGAGC AGTACACCGA CGAGCTCCAG
CAGATGACCG ACCGGCTCGA ACGACGGTCG GAGAATCTCC AGCGGCTCGT CGAGACGTTC
GGAGCGGCGG CCGAGCGAGC GGAGGCCGGA GATCTGACGG CGCGAATCGA CGCCGACGAG
ATCGACGGCG ACGAGGCGGT GTTCGACGAG GTCGTCACCA ACTACAACGA TCTGATCTCG
AACCTCGACC AGACGGTCGG TGACGTGACC GACTTCGCCG CGTCGGTCGC GACGGCGAGT
GATCGCGTCG ACGAGAACAT GAACGAGGTC GACAGGGCGA GCGAGGAGAT CGCGGCGTCC
GTCGACGAGA TCTCGACCGG CGCGACCAGA CAGACCGAGC GCCACGAGGA CGTGGCACGG
GAGATGAGCA AGCTCTCGGC GACCGTCGAA GAGATCGCAG CGACGGCAGA CGAGGCCGCA
CAGACTGCCA GAGACGCCGC AGAGCGCGGA GAGAACGGTC GAGAAGACGC GATCGAGGCG
CTGGACGAAC TCGACGAACT GGAGTCGAAG ATCGACCACA TCGCGACCGC GGTCGCGGAC
CTCGGAGAGC AGATCGCCGC GGTCGAGGAG ATCGTCGACG TGATCACCGA GATCGCCGAG
CAGACGAACA TGCTGGCACT GAACGCCTCG ATCGAGGCCG CACGGGCCGA CGGAACCGGC
GACGGGTTCG CAGTGGTCGC CGACGAGGTG AAGGCCCTGG CCGAGGAAAC GCGCGCGTCG
GCCGACGAGA TCGCTACGCT GGTCGAGTCG GTGAGCGAGG AAGCCGACGA GACGGTCACC
GAGGTCAGAG CGATGGACGA ACAGGTAGCG AGCTCGACGA CGACGATCGC GGCGGCGCTC
CGAGACTTCG AGGAGCTCGT CACCGTCGTC GGCGAAGTCG ACGACTCGAT GCAGGAGATC
TCCGACGCGA CCGGCGAGCA GGCGAAGACG ACCGAAGAGG TCGCCAAGGT GGTCGACGAT
CTGACCGCGG TGAGCGAACA GACCCGCGAC GAGGCCGAGC AGGCCTCGGC GGCCACTCAG
CAACAGACCG AGACCGTCGA GACCGTCTCG GAGGACATCG GGACCGTCGC GGACCGCGCC
GACGAACTGC TCGGAATGTT GCGCTCGTTC GAGACGGAGA CGACGGCCCA ACAGTCCGGC
AACGCACGCT CTCCCGCGGT CGCGGACGGT GGCCGTCCCG AAGCAGAGAC AGAGGACCGA
TCCCCGACGG AGAACGGCGG AAAGCCCGCG GATCGGTAG
 
Protein sequence
MSRTPMLSTL VGWYKRQIRR SLTLVGVDKS LERKIIAAVA IQFGVSLTLV VVSLFLSGIT 
QFALTIALLL GAVLVFVNTI FITREDIVGP ITTLADRADA IASGTVDIDV PDSDQPDEIG
TLVSSFSRVH GYFDTVSRQA DALARQEFDA AALDEEVPGE MGESLDHMAD NLEQYTDELQ
QMTDRLERRS ENLQRLVETF GAAAERAEAG DLTARIDADE IDGDEAVFDE VVTNYNDLIS
NLDQTVGDVT DFAASVATAS DRVDENMNEV DRASEEIAAS VDEISTGATR QTERHEDVAR
EMSKLSATVE EIAATADEAA QTARDAAERG ENGREDAIEA LDELDELESK IDHIATAVAD
LGEQIAAVEE IVDVITEIAE QTNMLALNAS IEAARADGTG DGFAVVADEV KALAEETRAS
ADEIATLVES VSEEADETVT EVRAMDEQVA SSTTTIAAAL RDFEELVTVV GEVDDSMQEI
SDATGEQAKT TEEVAKVVDD LTAVSEQTRD EAEQASAATQ QQTETVETVS EDIGTVADRA
DELLGMLRSF ETETTAQQSG NARSPAVADG GRPEAETEDR SPTENGGKPA DR