Gene Hmuk_2442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2442 
Symbol 
ID8411986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2343540 
End bp2344490 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content67% 
IMG OID645020784 
ProductABC transporter related 
Protein accessionYP_003178258 
Protein GI257388485 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0120547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA ACACTACCGA GACACGGCAG CGGAACGGCA GCGAGGAAGC GCTCTCGAAC 
GAGTCGGCCG CCGACGCTAT CGGCTCGAAG CAGGCGAGCG AGCTCTCGGG AGAGGATCTC
GTCCTCAGAT ACCCCTCGAT GGACGAGCCA GTGATCGACG GCGAGCGGCT CGTCGCGACG
CCGGGAGCGG TCACCGCCTT AGTCGGGCCG AACGGCTCCG GCAAGAGCAC GCTGTTGAAG
GGGCTCGCCA AGCAGCTCAC GCCCGACGAG GGGACGGTAC TTTTGGACGG CCGCGACGTT
CACTCGATGG GAACGAAGGA GCTGGCTCGC AAGCTCGGGC TGCTCTCCCA GGAGAGCACG
TCGCCGGAGT CGATCACGGT TGAGGACCTC GTCTACCACG GCCGATATCC CCACCGGGGA
TTCTTCGAGA CTACCACCGA GGAGGACAAC CGCGCGGTCG ACCGGGCGAT CGACCTCGCC
GGCTGCGGAC ACCTCCGTGA CCGCGAGGTC GGGAGCCTCT CGGGCGGGCA GAAACAGCTC
GCGTGGATCG CGATGGTGCT CGCACAGGAC ACCGACGTGT TACTGCTCGA CGAACCAACG
ACGTTCCTCG ACCTTCATCA CCAACTCGAA GTGATGGAAA TCGTCGAGAC GCTGCGTGAC
GAGAGCGACA TCACGGTCGT GGTCGTCCTC CACGACATCG AGCAGGCGGC CCGGCTCGCC
GACGAGATGG TCGCACTCAA GGACGGCGCG ATCCGGGCGC GCGGGACCCC CGAAGAGGTC
GTCACCGAGG AGTTGCTCGC GGACGTGTTC GAGATCGACG CCGAAGTCGA TGTCATCGAG
CGCGGGCCGC GGGTCACGCC GCTTCGGGCG CGGCACGACG ATGTCGACCG AGCAGGCGGC
GACGCCGAAG AGGCCGAGGG CTCTCCGCCG GAGGTACTCG AAGCCGAGTG A
 
Protein sequence
MARNTTETRQ RNGSEEALSN ESAADAIGSK QASELSGEDL VLRYPSMDEP VIDGERLVAT 
PGAVTALVGP NGSGKSTLLK GLAKQLTPDE GTVLLDGRDV HSMGTKELAR KLGLLSQEST
SPESITVEDL VYHGRYPHRG FFETTTEEDN RAVDRAIDLA GCGHLRDREV GSLSGGQKQL
AWIAMVLAQD TDVLLLDEPT TFLDLHHQLE VMEIVETLRD ESDITVVVVL HDIEQAARLA
DEMVALKDGA IRARGTPEEV VTEELLADVF EIDAEVDVIE RGPRVTPLRA RHDDVDRAGG
DAEEAEGSPP EVLEAE